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Getting started
Schema
Clear Filters
Annotation type
3
binding sites
2
histone modifications
1
accessible chromatin
1
target gene predictions
Annotation Category
6
cis-regulatory elements
1
Target gene links
Annotation type Category
5
ChIP-seq
1
ATAC-seq
1
pCHi-C
Available data
6
bed bed3+
File set status
7
released
Genome assembly (visualization)
6
hg19
Organism
7
Homo sapiens
Biosample type
4
in vitro differentiated cells
3
cell line
Biosample term
2636
whole blood
110
heart
105
stomach
95
kidney
93
fibroblast
89
brain
89
endothelial cell
86
head of caudate nucleus
84
muscle of arm
82
lung
81
placenta
75
A549
75
adrenal gland
75
small intestine
72
macrophage
70
muscle of leg
69
large intestine
69
muscle of back
69
smooth muscle cell
67
HeLa-S3
67
left lung
66
T-cell
65
common myeloid progenitor, CD34-positive
64
CD4-positive, alpha-beta T cell
63
B cell
59
dorsolateral prefrontal cortex
56
right lung
56
thymus
55
stimulated activated CD4-positive, alpha-beta T cell
54
hematopoietic multipotent progenitor cell
53
H1-hESC
52
neural progenitor cell
52
right kidney
51
hepatocyte
51
renal cortex interstitium
50
natural killer cell
50
renal pelvis
49
liver
48
posterior cingulate gyrus
47
K562
45
T cell
45
left kidney
44
heart left ventricle
43
retina
42
adipocyte
42
islet of Langerhans
40
spinal cord
39
CD8-positive, alpha-beta T cell
38
spleen
37
CD4-positive, alpha-beta memory T cell
37
cardiac muscle cell
33
activated CD4-positive, alpha-beta T cell
32
MCF-7
32
glutamatergic neuron
32
keratinocyte
32
pericyte
30
T-helper 1 cell
30
adipose tissue
30
astrocyte
29
heart right ventricle
29
pancreatic ductal cell
28
ovary
28
tibial nerve
27
body of pancreas
27
pancreas
26
CD8-positive, alpha-beta memory T cell
26
T-helper 17 cell
26
epithelial cell of proximal tubule
26
regulatory T cell
26
trophoblast cell
25
stimulated activated CD8-positive, alpha-beta memory T cell
24
CD14-positive monocyte
24
T-helper 2 cell
24
endothelial cell of lymphatic vessel
24
foreskin keratinocyte
24
neuron
24
pericyte cell
24
psoas muscle
23
caudate nucleus
23
gastrocnemius medialis
23
naive thymus-derived CD4-positive, alpha-beta T cell
23
sigmoid colon
23
upper lobe of left lung
22
GABAergic neuron
22
H9
22
HCT116
22
foreskin fibroblast
22
glomerular endothelial cell
21
endothelial cell of umbilical vein
21
right atrium auricular region
21
testis
21
thyroid gland
21
tibial artery
20
breast cancer cell
20
coronary artery
20
mononuclear cell
20
subcutaneous adipose tissue
19
HFFc6
19
endocardial cell
19
hepatic stellate cell
19
mesenchymal stem cell
19
omental fat pad
19
transverse colon
18
HepG2
18
ascending aorta
18
dendritic cell
18
naive thymus-derived CD8-positive, alpha-beta T cell
17
Peyer's patch
17
frontal cortex
17
muscle of trunk
17
pancreatic beta cell
16
cerebellum
16
chorionic villus
16
endothelial cell of hepatic sinusoid
16
fibroblast of cardiac tissue
16
fibroblast of lung
16
pigmented layer of retina
16
skeletal muscle satellite cell
16
substantia nigra
15
GM12878
15
activated T-cell
15
bronchial epithelial cell
15
erythroblast
15
induced pluripotent stem cell
15
mammary gland epithelial cell
15
mast cell
15
pancreatic alpha cell
15
pancreatic delta cell
15
retinal pigment epithelial cell
14
activated CD8-positive, alpha-beta memory T cell
14
aorta
14
endocrine pancreas
14
layer of hippocampus
14
left renal cortex interstitium
14
mammary epithelial cell
14
right renal pelvis
14
skeletal muscle myoblast
14
skeletal muscle tissue
13
dermis blood vessel endothelial cell
13
excitatory neuron
13
glomerular visceral epithelial cell
13
left cardiac atrium
13
naive B cell
13
osteoblast
13
prostate gland
12
Ammon's horn
12
SK-N-DZ
12
breast epithelium
12
colonic mucosa
12
fibroblast of dermis
12
left renal pelvis
12
lymphoblastoid cell line
12
monocyte
12
pancreatic acinar cell
11
choroid plexus epithelial cell
11
epithelial cell of prostate
11
esophagus muscularis mucosa
11
neurosphere
11
progenitor cell of endocrine pancreas
11
putamen
11
thoracic aorta
10
IMR-90
10
Rhabdomyosarcoma
10
endodermal cell
10
esophagus squamous epithelium
10
foreskin melanocyte
10
gastric cancer cell
10
inflammatory macrophage
10
limb
10
neuroblastoma cell
10
neuronal stem cell
10
thyroid follicular cell
9
22Rv1
9
GM06990
9
SK-N-MC
9
SK-N-SH
9
WERI-Rb-1
9
WI38
9
cardiomyocytes
9
diffuse intrinsic pontine glioma
9
esophagus
9
eye
9
globus pallidus
9
kidney tubule cell
9
lower leg skin
9
progenitor cell
9
temporal lobe
9
tongue
8
B Cell
8
GM12864
8
GM12865
8
HEK293
8
LNCaP clone FGC
8
NAMALWA cell
8
PC-9
8
T47D
8
cingulate gyrus
8
colon epithelial cell
8
duodenal mucosa
8
epithelial cell of esophagus
Date released
May, 2021
5
February, 2021
1
March, 2020
1
November, 2022
Software used
6
macs
1
nospecificsoft_customcode
Lab
6
AMP-T2D consortium
1
Struan F.A. Grant, CHOP
Project
7
AMP
Collection Tags
5
ChIP-Atlas
1
CMDGA
1
DGA
RFA
6
AMP
1
AMP2
month_released!
May, 2021
Showing 7 of 7 results
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Download
FileSet
DSR455VRI
released
Annotation file set
: Accessible chromatin of an established embryonic stem cell derived hypothalamic-like neuron model across three stages of in vitro differentiation (Embryonic Stem Cell).
Lab:
Struan F.A. Grant, CHOP
Project:
AMP
FileSet
DSR927IPU
released
Annotation file set
: Histone modifications annotation for Pluripotent stem cell Expanded_potential_stem_cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR134CON
released
Annotation file set
: Histone modifications annotation for Pluripotent stem cell Embryonic_Stem_Cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR161DPJ
released
Annotation file set
: Binding sites annotation for Pluripotent stem cell KhES-3 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR084KAX
released
Annotation file set
: Binding sites annotation for Pluripotent stem cell hESC_VAL-3 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR026FET
released
Annotation file set
: Binding sites annotation for Pluripotent stem cell Embryonic_Stem_Cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR929DUM
released
Annotation file set
: A target gene prediction annotation in Human Human ES Cells of GSE86189 pCHi-C
Lab:
AMP-T2D consortium
Project:
AMP