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Schema
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Annotation type
2
accessible chromatin
2
candidate regulatory elements
1
target gene predictions
Annotation Category
4
cis-regulatory elements
1
Target gene links
Annotation type Category
4
snATAC-seq
1
ATAC-seq
Available data
5
bed bed3+
2
bigWig
File set status
5
released
Genome assembly (visualization)
5
GRCh38
5
hg19
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
90
heart
34
heart left ventricle
21
coronary artery
19
heart right ventricle
19
right atrium auricular region
17
fibroblast of cardiac tissue
12
left cardiac atrium
8
right cardiac atrium
7
smooth muscle cell of the coronary artery
5
endocardial cell
5
left ventricle myocardium
4
cardiac fibroblast
2
cardiac endothelial cell
2
cardiac muscle myoblast
2
endothelial cell of coronary artery
2
ventricular cardiac muscle cell
1
aortic valve
1
cardiac atrium fibroblast
1
cardiac ventricle
1
cardiac ventricle fibroblast
1
fetal heart
1
mitral valve
1
pulmonary valve
1
tricuspid valve
Organ
5
epithelium
5
heart
Life stage
2
adult
Date released
3
November, 2021
2
May, 2024
Software used
2
macs
1
abc
Lab
3
Bing Ren, UCSD
2
Kyle Gaulton, UCSD
Project
3
ENCODE
2
AMP
Collection Tags
3
AMP
3
T2DKP
2
FNIH_projects-heart
RFA
3
ENCODE3
2
AMP2
Showing 5 of 5 results
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Download
FileSet
DSR535CDT
released
Annotation file set
: Candidate cis-Regulatory Elements (cCREs) of endocardial cell derived from RV snATAC-seq
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR372IIW
released
Annotation file set
: Candidate cis-Regulatory Elements (cCREs) of endocardial cell derived from LV snATAC-seq
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR291BPF
released
Annotation file set
: Target gene predictions of Endocardial Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR347CWT
released
Annotation file set
: Accessible chromatin annotation of Fetal Endocardial Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR978SWA
released
Annotation file set
: Accessible chromatin annotation of Endocardial Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE