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Schema
Citing CMDGA
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Assay category
3
DNA binding
2
Transcription
Assay
3
ChIP-seq
2
total RNA-seq
Project
5
AMP
RFA
5
AMP
Experiment status
5
released
Genome assembly (visualization)
4
GRCh38
4
hg19
Organism
5
Homo sapiens
Target of assay
2
histone
2
histone modification
1
broad histone mark
1
control
1
narrow histone mark
Biosample type
5
in vitro differentiated cells
Life stage
5
embryonic
Available data
5
bam
5
fastq
4
bigWig
2
bed narrowPeak
2
tsv
Platform
5
Illumina Genome Analyzer IIx
1
Illumina HiSeq 2000
Run type
5
single-ended
Read length (nt)
3
36
2
100
1
101
Library insert size (nt)
2
225-275
Library made from
3
DNA
2
RNA
Date released
5
February, 2018
Lab
5
AMP-T2D consortium
Replication type
5
unreplicated
biosample_type!
tissue
files.file_type!
bed bed3
organ_slims!
skeleton
Showing 5 of 5 results
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Experiment
TSTSR868970
released
total RNA-seq
of endocrine cell
Homo sapiens
endocrine cell
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR260845
released
total RNA-seq
of endocrine cell
Homo sapiens
endocrine cell
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR676477
released
ChIP-seq
of endocrine cell
Homo sapiens
endocrine cell
Target:
H3K4me3
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR105528
released
ChIP-seq
of endocrine cell
Homo sapiens
endocrine cell
Target:
H3K27me3
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR037297
released
ChIP-seq
of endocrine cell
Homo sapiens
endocrine cell
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP