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Annotation type
5
gene expression
Annotation Category
5
Gene expression levels
Annotation type Category
4
scRNA-seq
1
snRNA-seq
Available data
4
tsv
4
txt
File set status
5
released
Genome assembly (visualization)
1
hg19
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
4
endothelial cell
2
skeletal muscle fiber
1
B-1 B cell
1
B-2 B cell
1
CD8-positive, alpha-beta T cell
1
T-helper 17 cell
1
adipocyte
1
alternatively activated macrophage
1
dendritic cell
1
effector CD8-positive, alpha-beta T cell
1
epithelial cell of proximal tubule
1
glial cell
1
glomerular endothelial cell
1
inflammatory macrophage
1
kidney connecting tubule epithelial cell
1
kidney distal convoluted tubule epithelial cell
1
kidney granular cell
1
kidney inner medulla collecting duct epithelial cell
1
kidney interstitial fibroblast
1
kidney loop of Henle ascending limb epithelial cell
1
kidney loop of Henle thin descending limb epithelial cell
1
leukocyte
1
macrophage
1
mesenchymal stem cell
1
natural killer cell
1
neural cell
1
renal alpha-intercalated cell
1
renal beta-intercalated cell
1
renal principal cell
1
skeletal muscle satellite cell
1
smooth muscle cell
1
type I muscle cell
1
type II muscle cell
Organ
5
epithelium
1
kidney
Life stage
4
adult
Date released
4
August, 2021
1
February, 2024
Software used
26
r
21
macs
6
abc
4
seurat
3
deltasvm
2
rasqual
1
chromhmm
1
cicero
1
deeptools
1
eigenmt
1
encode-ccres
1
qTLtools
1
samtools
1
umitools
Lab
4
Katalin Susztak, Upenn
1
Stephen Parker, UMich
Project
5
AMP
RFA
5
AMP2
biosample_term_name!
kidney tubule cell
Showing 5 of 5 results
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Download
FileSet
DSR239ZHY
released
Annotation file set
: Gene expression of kidney from Katalin Susztak FNIH Project scRNA-seq for endothelial cell cluster 3
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR555DIA
released
Annotation file set
: Gene expression of kidney from Katalin Susztak FNIH Project scRNA-seq for endothelial cell cluster 2
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR901DMS
released
Annotation file set
: Gene expression of kidney from Katalin Susztak FNIH Project scRNA-seq for endothelial cell cluster 1
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR857ORD
released
Annotation file set
: Gene expression of kidney from Katalin Susztak FNIH Project scRNA-seq for glomerular endothelial cell
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR251UJD
released
Annotation file set
: Cell type gene expression mean TPM and bw of endothelial cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP