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Schema
Citing CMDGA
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Annotation type
1
accessible chromatin
1
gene expression
Annotation Category
1
Gene expression levels
1
cis-regulatory elements
Annotation type Category
1
RNA-seq
Available data
1
bed bed3+
1
bigWig
1
tsv
File set status
2
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
2
Homo sapiens
Biosample type
primary cell
1
in vitro differentiated cells
1
tissue
Biosample term
21
EndoC_BH1
20
pigmented layer of retina
11
breast epithelium
11
esophagus squamous epithelium
6
pancreatic ductal cell
6
retinal pigment epithelial cell
4
hepatocyte
4
keratinocyte
3
choroid plexus epithelial cell
3
colon epithelial cell
3
epithelial cell of prostate
3
foreskin keratinocyte
3
hepatocyte(AFP)
3
mammary gland epithelial cell
2
dermis lymphatic vessel endothelial cell
2
dermis microvascular lymphatic vessel endothelial cell
2
endothelial cell
2
glomerular visceral epithelial cell
2
kidney epithelium
2
pancreatic acinar cell
2
vein endothelial cell
1
breast
1
breast - mammary tissue
1
corneal epithelium
1
esophagus - mucosa
1
glomerular epithelium
1
intermediate endothelial cell
1
intestinal epithelium
1
nephron tubule
1
pancreatic A cell
1
pancreatic D cell
1
pancreatic PP cell
1
renal connecting tubule
1
renal cortex tubule
1
renal glomerulus
1
type B pancreatic cell
1
urothelial cell
Organ
2
epithelium
0
breast
Date released
1
February, 2024
1
May, 2021
Software used
1
macs
1
r
Lab
1
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Project
2
AMP
RFA
2
AMP
biosample_type!
primary cell
Showing 2 of 2 results
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Download
FileSet
DSR369PUU
released
Annotation file set
: accessible chromatin annotation from scATAC-seq of Endothelial
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR669UJX
released
Annotation file set
: Gene expression annotation of endothelial cell_EC ISL1-PECAM1+ on day 10 from embryonic stem cell
Lab:
AMP-T2D consortium
Project:
AMP