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Annotation type
2
caQTL
Annotation Category
2
Genetic variant effects
Annotation type Category
2
snATAC-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
2
endothelial cell
1
coronary artery
1
fibroblast of the aortic adventitia
1
liver
1
macrophage
1
mesenchymal stem cell
1
smooth muscle cell
1
smooth muscle cell of the coronary artery
1
type I muscle cell
1
type II muscle cell
Organ
2
epithelium
Date released
1
February, 2023
1
October, 2022
Software used
19
macs
10
r
6
abc
3
seurat
2
deltasvm
2
rasqual
1
cicero
1
deeptools
1
eigenmt
1
qTLtools
1
samtools
1
umitools
Lab
1
AMP-T2D consortium
1
Stephen Parker, UMich
Project
2
AMP
Collection Tags
1
T2DKP
1
CMDGA
1
DGA
RFA
1
AMP
1
AMP2
Showing 2 of 2 results
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Download
FileSet
DSR375DYB
released
Annotation file set
: Chromatin accessibility QTLs in endothelial cells passing genome-wide multiple testing correction (5% FDR) of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR259FVK
released
Annotation file set
: Chromatin site QTLs of endothelial cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP