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Schema
Citing CMDGA
Clear Filters
Annotation type
3
accessible chromatin
1
target gene predictions
Annotation Category
3
cis-regulatory elements
1
Target gene links
Annotation type Category
3
snATAC-seq
1
ATAC-seq
Available data
4
bed bed3+
3
bigWig
File set status
4
released
Genome assembly (visualization)
4
hg19
3
GRCh38
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
20
endothelial cell of umbilical vein
19
foreskin keratinocyte
17
keratinocyte
16
endothelial cell of hepatic sinusoid
16
foreskin fibroblast
12
fibroblast of dermis
10
dermis blood vessel endothelial cell
9
skin fibroblast
8
fibroblast of pulmonary artery
7
choroid plexus epithelial cell
7
pulmonary artery endothelial cell
6
dermis lymphatic vessel endothelial cell
6
smooth muscle cell of the brain vasculature
5
cardiac fibroblast
5
Afferent / Efferent Arteriole Endothelial Cell
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Vascular Smooth Muscle Cell
5
Glomerular Capillary Endothelial Cell
5
Lymphatic Endothelial Cell
5
Peritubular Capillary Endothelial Cell
5
Vascular Smooth Muscle Cell / Pericyte
5
brain microvascular endothelial cell
5
fibroblast of the aortic adventitia
5
kidney capillary endothelial cell
5
lung microvascular endothelial cell
4
aortic endothelial cell
4
endothelial cell of lymphatic vessel
4
pancreatic endothelial cell
4
vascular associated smooth muscle cell
3
epidermal melanocyte
3
smooth muscle cell of the coronary artery
2
basal cell of epidermis
2
capillary endothelial cell
2
dermis microvascular lymphatic vessel endothelial cell
2
endothelial cell of coronary artery
2
granular cell of epidermis
1
brain microvascular endothelial cell
1
aortic smooth muscle cell
1
cardiac fibroblast
1
fibroblast of arm
1
fibroblast of skin of abdomen
1
placental villus capillary endothelial cell
Organ
4
epithelium
4
lymphatic vessel
4
vasculature
0
skin of body
Date released
3
November, 2021
1
April, 2020
Software used
2
macs
1
abc
Lab
3
Bing Ren, UCSD
1
Xin Sun, UCSD
Project
3
ENCODE
1
LungMap
RFA
3
ENCODE3
1
LungMap2
month_released!
November, 2020
Showing 4 of 4 results
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Download
FileSet
DSR165PFW
released
Annotation file set
: ATAC-seq peaks in lymphatic endothelial cells from lung snATAC-seq
Lab:
Xin Sun, UCSD
Project:
LungMap
FileSet
DSR451QZS
released
Annotation file set
: Target gene predictions of Lymphatic Endothelial Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR427DYD
released
Annotation file set
: Accessible chromatin annotation of Lymphatic Endothelial Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR093JYI
released
Annotation file set
: Accessible chromatin annotation of Fetal Lymphatic Endothelial Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE