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Schema
Citing CMDGA
Clear Filters
Annotation type
5
chromatin state
Annotation Category
5
cis-regulatory elements
Annotation type Category
5
ChIP-seq
Available data
19
bed bed3+
5
bed bed9
2
bigBed bed9
1
bigWig
File set status
5
released
Genome assembly (visualization)
5
GRCh38
5
hg19
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
20
heart
18
brain
16
muscle of arm
15
lung
15
muscle of leg
14
placenta
14
stomach
13
kidney
13
large intestine
13
left lung
13
muscle of back
13
small intestine
11
right lung
11
thymus
10
right kidney
9
left kidney
9
renal cortex interstitium
9
renal pelvis
8
adrenal gland
7
spinal cord
6
CD4-positive, alpha-beta memory T cell
5
embryonic stem cell
5
heart left ventricle
5
trophoblast cell
4
chorionic villus
4
endothelial cell of umbilical vein
4
foreskin keratinocyte
4
heart right ventricle
4
muscle of trunk
4
neural progenitor cell
3
T-helper 17 cell
3
chorion membrane
3
common myeloid progenitor, CD34-positive
3
neurosphere
3
retina
2
22Rv1
2
B cell
2
CD8-positive, alpha-beta memory T cell
2
NAMALWA cell
2
SK-N-DZ
2
SK-N-SH
2
bronchial epithelial cell
2
dermis lymphatic vessel endothelial cell
2
endodermal cell
2
epithelial cell of prostate
2
eye
2
fibroblast of cardiac tissue
2
fibroblast of dermis
2
fibroblast of lung
2
foreskin fibroblast
2
germinal matrix
2
hepatocyte
2
keratinocyte
2
left renal cortex interstitium
2
left renal pelvis
2
limb
2
liver
2
neutrophil
2
right renal cortex interstitium
2
right renal pelvis
2
skin fibroblast
2
spleen
2
tongue
2
trophoblast
1
A673
1
AG04449 cell
1
AG04450 cell
1
BE(2)-C
1
BJ cell
1
CD14-positive monocyte
1
CD1c-positive myeloid dendritic cell
1
CMK
1
CWRU1
1
DND-41
1
Daoy
1
EH
1
EL
1
ELF-1
1
ELR
1
ES-I3
1
G401
1
GM03348
1
GM06990
1
GM08714
1
GM12864
1
GM12865
1
GM12891
1
GM12892
1
GM18507
1
H1-hESC
1
H7-hESC
1
H9
1
HEK293
1
HEK293T
1
HK-2 cell
1
HTR-8/Svneo
1
HUES48
1
HUES6
1
HUES64
1
HepG2
1
IMR-90
1
KOPT-K1
1
L1-S8
1
L1-S8R
1
MG63
1
NCI-H460 cell
1
NT2-D1 cell
1
PC-9
1
Panc1
1
SJCRH30
1
SK-N-MC
1
T cell
1
T-helper 1 cell
1
T-helper 2 cell
1
UCSF-4
1
WERI-Rb-1
1
WI38
1
adipocyte
1
amnion
1
amnion mesenchymal stem cell
1
amniotic stem cell
1
arm bone
1
astrocyte
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
astrocyte of the spinal cord
1
brain microvascular endothelial cell
1
cardiac mesoderm primordium
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
colon carcinoma
1
colon epithelial cell
1
dermis blood vessel endothelial cell
1
ectodermal cell
1
embryonic facial prominence
1
endocrine pancreas
1
epidermal melanocyte
1
epithelial cell of amnion
1
epithelial cell of esophagus
1
epithelial cell of proximal tubule
1
femur
1
fibroblast of gingiva
1
fibroblast of mammary gland
1
fibroblast of peridontal ligament
1
fibroblast of pulmonary artery
1
fibroblast of the aortic adventitia
1
fibroblast of the conjunctiva
1
fibroblast of villous mesenchyme
1
foreskin melanocyte
1
germinal center
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
hematopoietic multipotent progenitor cell
1
iPS DF 19.11
1
iPS DF 19.7
1
iPS DF 4.7 Cell Line
1
iPS DF 6.9
1
iris pigment epithelial cell
1
islet precursor cell
1
kidney capillary endothelial cell
1
kidney epithelial cell
1
left cardiac atrium
1
leg bone
1
lung microvascular endothelial cell
1
lymphocyte
1
mammary gland epithelial cell
1
medulloblastoma
1
mesenchymal stem cell
1
mesendoderm
1
mesodermal cell
1
mononuclear cell
1
naive T cell
1
neural cell
1
neuron
1
non-pigmented ciliary epithelial cell
1
osteoblast
1
ovary
1
pericyte cell
1
psoas muscle
1
pulmonary artery endothelial cell
1
regular cardiac myocyte
1
regulatory T cell
1
renal cortical epithelial cell
1
retinal pigment epithelial cell
1
sigmoid colon
1
skeletal muscle cell
1
skeletal muscle myoblast
1
skeletal muscle tissue
1
skin of body
1
smooth muscle cell
1
smooth muscle cell of the brain vasculature
1
stromal cell of bone marrow
1
testis
1
umbilical cord
1
urinary bladder
1
urothelium cell line
Organ
4
blood vessel
4
epithelium
4
vasculature
4
vein
Life stage
adult
2
newborn
1
unknown
Date released
3
September, 2022
2
January, 2020
Software used
5
chromhmm
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
biosample_term_name!
DOHH2
relevant_life_stage!
adult
Showing 5 of 5 results
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Download
FileSet
DSR660JUZ
released
Annotation file set
: Chromatin states for BSS00298 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR550HDB
released
Annotation file set
: Chromatin states for BSS00296 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR899YVI
released
Annotation file set
: Chromatin states for BSS01279 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR214PMG
released
Annotation file set
: ChromHMM 18-state model for endothelial cell of umbilical vein from ENCODE ChIP-seq data. ROADMAP HUVEC Umbilical Vein Endothelial Primary Cells
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR772SPX
released
Annotation file set
: ChromHMM 15-state model for endothelial cell of umbilical vein from ENCODE ChIP-seq data. ROADMAP HUVEC Umbilical Vein Endothelial Primary Cells
Lab:
AMP-T2D consortium
Project:
AMP