Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
3
cis-regulatory elements
1
Target gene links
Annotation type Category
4
ChIP-seq
3
DNase-seq
Available data
3
bed bed3+
1
bed bed9
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
22
epithelial cell of proximal tubule
20
glomerular endothelial cell
19
foreskin keratinocyte
19
hepatocyte
18
endothelial cell of umbilical vein
12
bronchial epithelial cell
10
dermis blood vessel endothelial cell
10
endothelial cell
10
glomerular visceral epithelial cell
10
keratinocyte
10
kidney tubule cell
10
mammary gland epithelial cell
9
retinal pigment epithelial cell
8
epithelial cell of prostate
8
kidney glomerular epithelial cell
8
mammary epithelial cell
8
myoepithelial cell of mammary gland
8
renal cortical epithelial cell
7
choroid plexus epithelial cell
7
kidney epithelial cell
7
kidney loop of Henle thin ascending limb epithelial cell
7
pancreatic ductal cell
7
pulmonary artery endothelial cell
6
dermis lymphatic vessel endothelial cell
5
brain microvascular endothelial cell
5
iris pigment epithelial cell
5
kidney capillary endothelial cell
5
kidney cortex collecting duct principal cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
lung microvascular endothelial cell
5
non-pigmented ciliary epithelial cell
5
pancreatic beta cell
5
tracheal epithelial cell
4
aortic endothelial cell
4
epithelial cell of esophagus
4
pancreatic alpha cell
3
S-shaped body
3
epidermal melanocyte
3
epithelial cell of amnion
3
kidney collecting duct intercalated cell
3
kidney connecting tubule epithelial cell
3
kidney cortex collecting duct intercalated cell
3
kidney distal convoluted tubule epithelial cell
3
kidney inner medulla collecting duct principal cell
3
kidney loop of Henle descending limb epithelial cell
3
luminal epithelial cell of mammary gland
3
meso-epithelial cell
3
pancreatic acinar cell
3
pancreatic delta cell
2
dermis microvascular lymphatic vessel endothelial cell
2
endothelial cell of coronary artery
2
kidney inner medulla collecting duct intercalated cell
2
pancreatic polypeptide-secreting cell
2
renal vesicle
1
brain microvascular endothelial cell
1
retinal pigment epithelial cell
1
Liver fetal (hepatocyte)
1
amniotic epithelial cell
1
cholangiocyte
1
epithelial cell of distal tubule
1
intestinal epithelial cell
1
proximal tubule
1
renal connecting tubule
1
ureteric bud
Organ
4
epithelium
4
esophagus
Life stage
4
unknown
Date released
3
September, 2022
1
February, 2021
Software used
2
r
1
chromhmm
1
encode-ccres
Lab
4
AMP-T2D consortium
2
Bing Ren, UCSD
Project
4
AMP
RFA
4
AMP
Showing 4 of 4 results
table-tab-icon
matrix-icon
Download
FileSet
DSR436AEJ
released
Annotation file set
: Candidate regulatory elements for BSS00307 epithelial cell of esophagus from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR005XGT
released
Annotation file set
: Target gene predictions for BSS00307 epithelial cell of esophagus from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR929IPZ
released
Annotation file set
: Chromatin states for BSS00307 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR685PAG
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE epithelial cell of esophagus
Lab:
AMP-T2D consortium
Project:
AMP