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Schema
Citing CMDGA
Clear Filters
Annotation type
4
eQTL
2
chromatin state
Annotation Category
4
Genetic variant effects
2
cis-regulatory elements
Annotation type Category
4
RNA-seq
2
ChIP-seq
Available data
2
bed bed3+
1
bigBed bed9
File set status
6
released
Genome assembly (visualization)
4
GRCh38
2
hg19
Organism
6
Homo sapiens
Biosample type
5
tissue
1
primary cell
Biosample term
7
macrophage
6
lymphoblastoid cell line
5
islet of Langerhans
4
adipocyte
3
blood cell
3
liver
3
monocyte
3
skin of body
3
substantia nigra
2
ESC derived cell line
2
T cell
2
brain
2
caudate nucleus
2
fibroblast
2
iPSC derived cell line
2
layer of hippocampus
2
muscle
2
pancreas
2
putamen
2
regulatory T cell
2
subcutaneous adipose tissue
1
CD34-PB
1
GM12878
1
H1-hESC
1
HepG2
1
K562
1
Leydig cell
1
T follicular helper cell
1
T-helper 1 cell
1
T-helper 17 cell
1
T-helper 2 cell
1
abdominal aorta artery
1
activated CD4-positive, alpha-beta T cell
1
activated CD8-positive, alpha-beta T cell
1
adipose tissue
1
adrenal gland
1
amygdala
1
anterior cingulate cortex
1
astrocyte
1
breast
1
cell
1
cerebellar hemisphere
1
cerebellum
1
cingulate gyrus
1
colon sigmoid
1
colonic mucosa
1
coronary artery
1
cortex
1
cortex of kidney
1
dorsolateral prefrontal cortex
1
duodenal mucosa
1
endothelial cell of umbilical vein
1
esophagus
1
esophagus mucosa
1
esophagus muscularis mucosa
1
excitatory neuron
1
fat cell
1
fibroblast of lung
1
frontal cortex
1
heart left ventricle
1
helper T cell
1
hippocampal neuron
1
hypothalamus
1
keratinocyte
1
lower motor neuron
1
lung
1
mammary epithelial cell
1
microglial cell
1
mid-frontal lobe
1
minor salivary gland
1
mucosa of rectum
1
naive B cel
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
naive thymus-derived CD8-positive, alpha-beta T cell
1
natural killer cell
1
neutrophil
1
nucleus accumbens
1
ovary
1
pituitary gland
1
placenta
1
prostate gland
1
rectum smooth muscle tissue
1
right atrium auricular region
1
sensory neuron
1
skeletal muscle
1
skeletal muscle myoblast
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
stomach smooth muscle
1
subcutaneous abdominal adipose tissue
1
temporal lobe
1
testis
1
thyroid gland
1
tibial artery
1
tibial nerve
1
transverse colon
1
uterus
1
vagina
1
visceral abdominal adipose tissue
Organ
5
pancreas
1
connective tissue
Date released
9
February, 2021
8
August, 2021
6
March, 2023
4
January, 2022
March, 2020
3
May, 2020
3
May, 2021
2
August, 2017
2
November, 2021
1
April, 2019
1
February, 2024
1
January, 2018
1
January, 2020
1
June, 2020
1
November, 2019
1
September, 2022
Software used
4
qTLtools
2
chromhmm
Lab
5
AMP-T2D consortium
1
Stephen Parker, UMich
Project
6
AMP
RFA
6
AMP
month_released!
March, 2020
Showing 6 of 6 results
table-tab-icon
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Download
FileSet
DSR133QIK
released
Annotation file set
: tx pancreatic islet eQTL of studay van_de_Bunt_2015 from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR426HGZ
released
Annotation file set
: pancreatic islet eQTL of studay van_de_Bunt_2015 from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR397NBY
released
Annotation file set
: exon pancreatic islet eQTL of studay van_de_Bunt_2015 from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR842MUA
released
Annotation file set
: fat eQTL of studay TwinsUK from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR679993
released
Annotation file set
: ChromHMM 13-state model for Islets
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
TSTSR043890
released
Annotation file set
: ChromHMM 18-state model for Islets
Lab:
AMP-T2D consortium
Project:
AMP