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Schema
Citing CMDGA
Clear Filters
Annotation type
3
candidate regulatory elements
2
accessible chromatin
Annotation Category
5
cis-regulatory elements
Annotation type Category
5
snATAC-seq
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
GRCh38
5
hg19
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
86
monocyte
30
common myeloid progenitor, CD34-positive
20
B cell
18
CD8-positive, alpha-beta T cell
12
natural killer cell
10
CD8-positive, alpha-beta memory T cell
10
endothelial cell of hepatic sinusoid
10
mononuclear cell
9
CD14-positive monocyte
7
T cell
6
CD4-positive, alpha-beta memory T cell
6
T-helper 1 cell
6
fibroblast of breast
6
hepatocyte
6
kidney tubule cell
6
myoepithelial cell of mammary gland
5
CD4-positive, alpha-beta T cell
5
T-helper 2 cell
5
endothelial cell
5
fibroblast
5
regulatory T cell
4
dermis blood vessel endothelial cell
4
fibroblast of lung
4
glutamatergic neuron
4
hepatic stellate cell
4
kidney glomerular epithelial cell
4
macrophage
4
mammary gland epithelial cell
4
naive T cell
4
pancreatic alpha cell
4
pancreatic beta cell
4
peripheral blood mononuclear cell
3
endothelial cell of lymphatic vessel
3
fibroblast of dermis
3
mast cell
3
naive thymus-derived CD4-positive, alpha-beta T cell
3
pancreatic delta cell
3
skeletal muscle myoblast
3
skeletal muscle satellite cell
3
smooth muscle cell
2
cardiac fibroblast
2
T-cell
2
adipocyte
2
endocardial cell
2
fibroblast of cardiac tissue
2
luminal epithelial cell of mammary gland
2
mammary epithelial cell
2
mammary stem cell
2
neuronal stem cell
2
neutrophil
2
pancreatic polypeptide-secreting cell
2
pericyte cell
2
regular ventricular cardiac myocyte
1
cardiac fibroblast
1
cell
1
cholangiocyte
1
dendritic cell
1
erythrocyte
1
gabaergic neuron
1
glomerular visceral epithelial cell
1
kidney distal convoluted tubule epithelial cell
1
kidney interstitial cell
1
kidney loop of Henle epithelial cell
1
kidney proximal convoluted tubule epithelial cell
1
kidney proximal convoluted tubule epithelial cell & kidney proximal straight tubule epithelial cell
1
kidney proximal straight tubule epithelial cell
1
lymphocyte(CL:0000542) and natural killer cell(CL:0000623)
1
macrophage(CL:0000235) and neutrophil(CL:0000775)
1
mesenchymal stem cell
1
microglial cell/astrocyte
1
myofibroblast cell
1
neuron
1
non-neuronal cell
1
oligodendrocyte
1
osteoblast
1
pancreatic endothelial cell
1
pancreatic immune cell
1
pancreatic stellate cell
1
proximal tubule cells with injury markers
1
renal intercalated cell
1
renal principal cell
Disease term
2
heart failure
1
liver disease
Organ
5
connective tissue
Life stage
5
adult
Date released
3
May, 2024
2
May, 2022
Software used
2
macs
Lab
3
Kyle Gaulton, UCSD
2
Bing Ren, UCSD
Project
5
AMP
RFA
5
AMP2
Showing 5 of 5 results
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Download
FileSet
DSR064ENS
released
Annotation file set
: Candidate cis-Regulatory Elements (cCREs) of fibroblast derived from liver snATAC-seq
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR912ZCS
released
Annotation file set
: Candidate cis-Regulatory Elements (cCREs) of fibroblast derived from RV snATAC-seq
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR245GWZ
released
Annotation file set
: Candidate cis-Regulatory Elements (cCREs) of fibroblast derived from LV snATAC-seq
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR548JZG
released
Annotation file set
: Accessible chromatin annotation of Fibroblast(sub-type 2) from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP
FileSet
DSR988BGT
released
Annotation file set
: Accessible chromatin annotation of Fibroblast(sub-type 1) from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP