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Annotation type
  • 2accessible chromatin
Annotation Category
  • 2cis-regulatory elements
Annotation type Category
  • 2snATAC-seq
Available data
  • 2bed bed3+
File set status
  • 2released
Genome assembly (visualization)
  • 2GRCh38
  • 2hg19
Organism
  • 2Homo sapiens
Biosample type
  • 2primary cell
Biosample term
  • 7mature neutrophil
  • 5CD14-positive, CD16-negative classical monocyte
  • 4alternatively activated macrophage
  • 3CD4-positive, alpha-beta T cell
  • 3inflammatory macrophage
  • 2endothelial cell
  • 2erythroblast
  • 2fibroblast
  • 2liver
  • 2smooth muscle cell
  • 1BL-2 cell
  • 1CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
  • 1CD8-positive, alpha-beta T cell
  • 1DG-75 cell
  • 1JVM-2 cell
  • 1KARPAS-422 cell
  • 1SUDHL5
  • 1T cell
  • 1U-266 cell
  • 1Z-138
  • 1leukocyte
  • 1macrophage
  • 1mature eosinophil
  • 1mesenchymal stem cell
  • 1skeletal muscle satellite cell
  • 1type I muscle cell
  • 1type II muscle cell
Organ
  • 2connective tissue
Life stage
  • 2adult
Date released
  • 18November, 2021
  • 6February, 2024
  • 3February, 2021
  • 3May, 2024
  • 2January, 2022
  • 2May, 2022
  • 1October, 2022
Software used
  • 2macs
Lab
  • 2Bing Ren, UCSD
Project
  • 2AMP
Collection Tags
  • 2AMP
  • 2DGA
  • 2ENCODE
RFA
  • 2AMP2

Showing 2 of 2 results

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  • FileSet

    DSR548JZG

    released

    Annotation file set: Accessible chromatin annotation of Fibroblast(sub-type 2) from snATAC from Bing Ren Lab
    Lab: Bing Ren, UCSD
    Project: AMP
  • FileSet

    DSR988BGT

    released

    Annotation file set: Accessible chromatin annotation of Fibroblast(sub-type 1) from snATAC from Bing Ren Lab
    Lab: Bing Ren, UCSD
    Project: AMP
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