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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
2
target gene predictions
Annotation Category
2
Target gene links
2
cis-regulatory elements
Annotation type Category
4
ChIP-seq
4
DNase-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
2
in vitro differentiated cells
2
primary cell
Biosample term
41
heart
39
stomach
36
A549
35
kidney
33
brain
33
lung
32
muscle of arm
30
small intestine
29
adrenal gland
28
placenta
26
large intestine
26
left lung
26
muscle of back
26
muscle of leg
22
right lung
22
thymus
20
common myeloid progenitor, CD34-positive
20
right kidney
19
hematopoietic multipotent progenitor cell
18
left kidney
18
renal cortex interstitium
18
renal pelvis
16
epithelial cell of proximal tubule
16
liver
15
adipose tissue
15
monocyte
15
neural progenitor cell
14
B cell
14
glomerular endothelial cell
14
spinal cord
13
islet of Langerhans
13
spleen
12
K562
11
T-helper 1 cell
11
cardiomyocytes
11
heart left ventricle
11
regulatory T cell
10
CD8-positive, alpha-beta memory T cell
10
MCF-7
10
body of pancreas
10
endothelial cell
10
hepatocyte
10
mononuclear cell
10
sigmoid colon
10
trophoblast cell
9
induced pluripotent stem cell
9
ovary
8
EndoC_BH1
8
chorionic villus
8
foreskin keratinocyte
8
gastrocnemius medialis
8
muscle of trunk
8
natural killer cell
8
psoas muscle
8
thyroid gland
8
tibial nerve
8
transverse colon
7
T-helper 17 cell
7
T-helper 2 cell
7
caudate nucleus
7
glomerular visceral epithelial cell
7
heart right ventricle
7
kidney loop of Henle thin ascending limb epithelial cell
7
retina
7
testis
6
CD14-positive monocyte
6
CD4-positive, alpha-beta memory T cell
6
HeLa-S3
6
Peyer's patch
6
T cell
6
cerebellum
6
endocrine pancreas
6
endometrium adenocarcinoma
6
frontal cortex
6
immortal human breast epithelial cell line cell
6
kidney interstitial cell
6
layer of hippocampus
6
neurosphere
6
omental fat pad
6
pancreatic acinar cell
6
pancreatic alpha cell
6
pancreatic beta cell
6
pancreatic delta cell
6
pancreatic ductal cell
6
right atrium auricular region
6
upper lobe of left lung
5
aorta
5
ascending aorta
5
coronary artery
5
kidney cortex collecting duct principal cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
kidney tubule cell
5
mesangial cell
5
mesenchymal stem cell
5
pancreatic stellate cell
5
skeletal muscle tissue
5
subcutaneous adipose tissue
5
substantia nigra
5
temporal lobe
5
tibial artery
5
vagina
4
Brodmann (1909) area 46
4
LNCaP clone FGC
4
NAMALWA cell
4
SK-N-DZ
4
SK-N-SH
4
T47D
4
adipocyte
4
angular gyrus
4
bone tissue
4
breast epithelium
4
chorion membrane
4
cingulate gyrus
colonic mucosa
4
dermis blood vessel endothelial cell
4
duodenal mucosa
4
endodermal cell
4
endothelial cell of umbilical vein
4
esophagus
4
esophagus muscularis mucosa
4
esophagus squamous epithelium
4
eye
4
fibroblast of breast
4
fibroblast of cardiac tissue
4
foreskin fibroblast
4
gamma-delta T cell
4
kidney connecting tubule epithelial cell
4
kidney distal convoluted tubule epithelial cell
4
left renal cortex interstitium
4
left renal pelvis
4
limb
4
lower leg skin
4
mammary gland epithelial cell
4
mucosa of rectum
4
muscle cell
4
muscle layer of colon
4
muscle layer of duodenum
4
myoepithelial cell of mammary gland
4
naive T cell
4
nephron progenitor
4
pancreas
4
pancreatic MUC5B+ductal cell
4
pancreatic alpha+beta cell
4
pancreatic cycling alpha cell
4
pancreatic endothelial cell
4
pancreatic gamma+epsilon cell
4
pancreatic macrophage cell
4
pancreatic mast cell
4
parathyroid adenoma
4
prostate gland
4
right renal cortex interstitium
4
right renal pelvis
4
skeletal muscle satellite cell
4
skin fibroblast
4
smooth muscle cell
4
stomach smooth muscle
4
thoracic aorta
4
tongue
4
trophoblast
4
urinary bladder
3
Adaptive / Maladaptive / Repairing Fibroblast
3
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
3
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
3
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
3
Afferent / Efferent Arteriole Endothelial Cell
3
Ammon's horn
3
B Cell
3
CD8-positive, alpha-beta T cell
3
Classical Dendritic Cell
3
Connecting Tubule Cell
3
Connecting Tubule Intercalated Cell Type A
3
Connecting Tubule Principal Cell
3
Cortical Thick Ascending Limb Cell
3
Cycling Endothelial Cell
3
Cycling Epithelial Cell
3
Cycling Mononuclear Phagocyte
3
Cycling T Cell
3
Cytotoxic T Cell
3
Degenerative Connecting Tubule Cell
3
Degenerative Connecting Tubule Cell / Principal Cell
3
Degenerative Cortical Thick Ascending Limb Cell
3
Degenerative Distal Convoluted Tubule Cell
3
Degenerative Intercalated Cell Type A
3
Degenerative Peritubular Capillary Endothelial Cell
3
Degenerative Principal Cell
3
Degenerative Proximal Tubule Epithelial Cell
3
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
3
Degenerative Vascular Smooth Muscle Cell
3
Descending Thin Limb Cell Type 1
3
Distal Convoluted Tubule Cell Type 1
3
Fibroblast
3
Glomerular Capillary Endothelial Cell
3
Intercalated Cell Type A
3
Intercalated Cell Type B
3
Lymphatic Endothelial Cell
3
M2 Macrophage
3
Mast Cell
3
Medullary Thick Ascending Limb Cell
3
Mesangial Cell
3
Monocyte
Organ
2
connective tissue
2
skin of body
Life stage
unknown
2
adult
2
embryonic
Date released
4
September, 2022
Software used
4
r
3
chromhmm
3
macs
2
abc
2
encode-ccres
1
nospecificsoft_customcode
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
biosample_term_name!
colonic mucosa
relevant_life_stage!
unknown
Showing 4 of 4 results
table-tab-icon
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Download
FileSet
DSR507CRE
released
Annotation file set
: Candidate regulatory elements for BSS01263 mesendoderm from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR101GJQ
released
Annotation file set
: Candidate regulatory elements for BSS00335 fibroblast of dermis from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR401CTI
released
Annotation file set
: Target gene predictions for BSS01263 mesendoderm from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR226OCD
released
Annotation file set
: Target gene predictions for BSS00335 fibroblast of dermis from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP