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Clear Filters
Annotation type
  • 2binding sites
  • 2candidate regulatory elements
  • 1accessible chromatin
  • 1chromatin state
  • 1histone modifications
  • 1target gene predictions
Annotation Category
  • 7cis-regulatory elements
  • 1Target gene links
Annotation type Category
  • 7ChIP-seq
  • 4DNase-seq
Available data
  • 7bed bed3+
  • 1bed bed9
File set status
  • 8released
Genome assembly (visualization)
  • 8hg19
  • 1GRCh38
Organism
  • 8Homo sapiens
Biosample type
  • 8primary cell
Biosample term
  • 26MCF-7
  • 16mammary gland epithelial cell
  • 10mammary epithelial cell
  • 8fibroblast of mammary gland
  • 8myoepithelial cell of mammary gland
  • 7T47D
  • 7luminal epithelial cell of mammary gland
  • 3MCF 10A
  • 2mammary gland
Organ
  • 8connective tissue
  • 8mammary gland
Life stage
  • 4unknown
Date released
  • 3February, 2021
  • 3September, 2022
  • 1June, 2020
  • 1October, 2022
Software used
  • 3macs
  • 2chromhmm
  • 2r
  • 1encode-ccres
Lab
  • 8AMP-T2D consortium
Project
  • 8AMP
Collection Tags
  • 3ChIP-Atlas
  • 3EpiMap
  • 2ENCODE
RFA
  • 8AMP

Showing 8 of 8 results

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  • FileSet

    DSR206JZN

    released

    Annotation file set: Binding sites annotation for fibroblast of mammary gland (HMF) for GOLDENPATH ENCODE DCC
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR025HFM

    released

    Annotation file set: Candidate regulatory elements for BSS00343 fibroblast of mammary gland from EpiMap
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR802BSP

    released

    Annotation file set: Target gene predictions for BSS00343 fibroblast of mammary gland from EpiMap
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR848OMG

    released

    Annotation file set: Chromatin states for BSS00343 using the 18-state Roadmap model from EpiMap
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR349CZE

    released

    Annotation file set: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE fibroblast of mammary gland
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR268BLV

    released

    Annotation file set: Histone modifications annotation for Breast HMF from ChIP-atlas
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR642FLL

    released

    Annotation file set: Binding sites annotation for Breast HMF from ChIP-atlas
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR284SDQ

    released

    Annotation file set: Accessible chromatin annotation for Breast HMF from ChIP-atlas
    Lab: AMP-T2D consortium
    Project: AMP
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