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Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
1
candidate regulatory elements
1
target gene predictions
Annotation Category
2
cis-regulatory elements
1
Target gene links
Annotation type Category
3
DNase-seq
2
ChIP-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
127
monocyte
42
CD8-positive, alpha-beta T cell
35
endothelial cell
31
fibroblast
31
macrophage
30
B cell
28
hepatocyte
27
common myeloid progenitor, CD34-positive
23
CD14-positive monocyte
23
pericyte cell
22
smooth muscle cell
21
regulatory T cell
18
CD4-positive, alpha-beta memory T cell
18
T cell
17
T-helper 1 cell
17
pancreatic beta cell
16
T-helper 17 cell
16
endothelial cell of hepatic sinusoid
16
natural killer cell
16
pancreatic acinar cell
16
pancreatic delta cell
16
pancreatic ductal cell
15
pancreatic alpha cell
14
CD8-positive, alpha-beta memory T cell
14
astrocyte
12
T-helper 2 cell
12
excitatory neuron
12
mononuclear cell
11
neutrophil
10
keratinocyte
10
naive thymus-derived CD4-positive, alpha-beta T cell
10
skeletal muscle satellite cell
10
trophoblast cell
9
endothelial cell of umbilical vein
9
fibroblast of cardiac tissue
9
mammary gland epithelial cell
9
memory B cell
9
naive thymus-derived CD8-positive, alpha-beta T cell
9
skeletal muscle fiber
8
foreskin keratinocyte
8
glutamatergic neuron
8
osteoblast
8
pancreatic stellate cell
8
skeletal muscle myoblast
7
endothelial cell of lymphatic vessel
7
erythroblast
7
fibroblast of dermis
7
fibroblast of lung
7
glomerular endothelial cell
7
hepatic stellate cell
7
kidney tubule cell
7
mast cell
7
skin fibroblast
7
type I muscle cell
7
type II muscle cell
7
type II pneumocyte
6
adipocyte
6
colon epithelial cell
6
cortical cell of adrenal gland
6
enterocyte
6
epithelial cell of proximal tubule
6
kidney glomerular epithelial cell
6
luminal epithelial cell of mammary gland
6
naive B cell
6
naive T cell
6
neurosphere
6
olfactory receptor cell
6
pancreatic polypeptide-secreting cell
6
renal cortical epithelial cell
5
cardiac fibroblast
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
5
Afferent / Efferent Arteriole Endothelial Cell
5
B Cell
5
CD4-positive helper T cell
5
Classical Dendritic Cell
5
Connecting Tubule Cell
5
Connecting Tubule Intercalated Cell Type A
5
Connecting Tubule Principal Cell
5
Cortical Thick Ascending Limb Cell
5
Cycling Endothelial Cell
5
Cycling Epithelial Cell
5
Cycling T Cell
5
Cytotoxic T Cell
5
Degenerative Connecting Tubule Cell
5
Degenerative Connecting Tubule Cell / Principal Cell
5
Degenerative Cortical Thick Ascending Limb Cell
5
Degenerative Distal Convoluted Tubule Cell
5
Degenerative Intercalated Cell Type A
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Principal Cell
5
Degenerative Proximal Tubule Epithelial Cell
5
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
5
Degenerative Vascular Smooth Muscle Cell
5
Descending Thin Limb Cell Type 1
5
Distal Convoluted Tubule Cell Type 1
5
Fibroblast
5
Glomerular Capillary Endothelial Cell
5
Intercalated Cell Type A
5
Intercalated Cell Type B
5
Lymphatic Endothelial Cell
5
M2 Macrophage
5
Medullary Thick Ascending Limb Cell
5
Mesangial Cell
5
Monocyte
5
Monocyte-derived Cell
5
Myofibroblast
5
Natural Killer T Cell
5
Natural Killer T Cell Type 1
5
Natural Killer T Cell Type 2
5
Non-Classical Monocyte
5
Parietal Epithelial Cell
5
Peritubular Capillary Endothelial Cell
5
Plasma Cell
5
Plasmacytoid Dendritic Cell
5
Podocyte
5
Principal Cell
5
Proximal Tubule Epithelial Cell Segment 1 and 2
5
Proximal Tubule Epithelial Cell Segment 3
5
Regulatory T Cell
5
Renin-positive Juxtaglomerular Granular Cell
5
T Cell
5
T follicular helper cell
5
Transitional Principal-Intercalated Cell
5
Vascular Smooth Muscle Cell / Pericyte
5
basal cell
5
bronchial epithelial cell
central memory CD8-positive, alpha-beta T cell
5
effector memory CD8-positive, alpha-beta T cell
5
endocardial cell
5
epithelial cell of prostate
5
gabaergic neuron
5
glomerular visceral epithelial cell
5
inhibitory neuron
5
kidney epithelial cell
5
mesenchymal stem cell
5
myofibroblast cell
5
pancreatic endothelial cell
5
retinal pigment epithelial cell
4
CD4-positive, alpha-beta T cell
4
activated CD4-positive, alpha-beta T cell
4
astrocyte of the cerebellum
4
astrocyte of the hippocampus
4
blood vessel smooth muscle cell
4
cardiac muscle cell
4
choroid plexus epithelial cell
4
dermis blood vessel endothelial cell
4
dermis lymphatic vessel endothelial cell
4
effector CD4-positive, alpha-beta T cell
4
effector T cell
4
enteric smooth muscle cell
4
epithelial cell of esophagus
4
fibroblast of breast
4
foreskin fibroblast
4
gamma-delta T cell
4
kidney capillary endothelial cell
4
mature natural killer cell
4
megakaryocyte
4
memory T cell
4
memory regulatory T cell
4
mesothelial cell
4
myoepithelial cell of mammary gland
4
pancreatic MUC5B+ductal cell
4
pancreatic alpha+beta cell
4
pancreatic cycling alpha cell
4
pancreatic gamma+epsilon cell
4
pancreatic macrophage cell
4
pancreatic mast cell
4
skeletal muscle cell
4
smooth muscle cell of the brain vasculature
4
smooth muscle cell of the esophagus
4
type I pneumocyte
3
CD1c-positive myeloid dendritic cell
3
Cycling Mononuclear Phagocyte
3
Mast Cell
3
Schwann cell
3
activated CD8-positive, alpha-beta T cell
3
aortic endothelial cell
3
blood cell
3
brain microvascular endothelial cell
3
ciliated cell
3
club cell
3
enteric neuron
3
fibroblast of mammary gland
3
fibroblast of peridontal ligament
3
fibroblast of pulmonary artery
3
fibroblast of the aortic adventitia
3
fibroblast of villous mesenchyme
3
glial cell
3
goblet cell
3
iris pigment epithelial cell
3
leukocyte
3
mesangial cell
3
microglial cell
3
naive B cel
3
naive regulatory T cell
3
naive t cell
3
non-pigmented ciliary epithelial cell
Organ
3
connective tissue
Life stage
2
unknown
Date released
2
September, 2022
February, 2021
1
June, 2020
Software used
2
r
chromhmm
1
macs
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
biosample_term_name!
central memory CD8-positive, alpha-beta T cell
month_released!
February, 2021
software_used.software.name!
chromhmm
Showing 3 of 3 results
table-tab-icon
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Download
FileSet
DSR197PKJ
released
Annotation file set
: Candidate regulatory elements for BSS00344 fibroblast of peridontal ligament from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR299QOE
released
Annotation file set
: Target gene predictions for BSS00344 fibroblast of peridontal ligament from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR585DKC
released
Annotation file set
: Accessible chromatin annotation for Others HPdLF from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP