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Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
1
candidate regulatory elements
1
chromatin state
1
target gene predictions
1
variant allelic effects
Annotation Category
3
cis-regulatory elements
1
Genetic variant effects
1
Target gene links
Annotation type Category
4
DNase-seq
3
ChIP-seq
Available data
3
bed bed3+
1
bed bed9
1
bigWig
File set status
5
released
Genome assembly (visualization)
4
hg19
2
GRCh38
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
20
endothelial cell of umbilical vein
16
endothelial cell of hepatic sinusoid
10
dermis blood vessel endothelial cell
8
fibroblast of pulmonary artery
7
choroid plexus epithelial cell
7
pulmonary artery endothelial cell
6
dermis lymphatic vessel endothelial cell
6
smooth muscle cell of the brain vasculature
5
cardiac fibroblast
5
Afferent / Efferent Arteriole Endothelial Cell
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Vascular Smooth Muscle Cell
5
Glomerular Capillary Endothelial Cell
5
Lymphatic Endothelial Cell
5
Peritubular Capillary Endothelial Cell
5
Vascular Smooth Muscle Cell / Pericyte
5
brain microvascular endothelial cell
5
fibroblast of the aortic adventitia
5
kidney capillary endothelial cell
5
lung microvascular endothelial cell
4
aortic endothelial cell
4
endothelial cell of lymphatic vessel
4
pancreatic endothelial cell
4
vascular associated smooth muscle cell
3
smooth muscle cell of the coronary artery
2
capillary endothelial cell
2
dermis microvascular lymphatic vessel endothelial cell
2
endothelial cell of coronary artery
1
brain microvascular endothelial cell
1
aortic smooth muscle cell
1
cardiac fibroblast
1
placental villus capillary endothelial cell
Organ
5
blood vessel
5
epithelium
5
kidney
5
vasculature
Life stage
4
embryonic
1
fetal
Date released
3
September, 2022
1
January, 2020
1
May, 2020
Software used
2
r
1
chromhmm
1
deltasvm
1
macs
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
biosample_term_name!
gabaergic neuron
Showing 5 of 5 results
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Download
FileSet
DSR302SLS
released
Annotation file set
: Candidate regulatory elements for BSS01077 kidney capillary endothelial cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR668BHK
released
Annotation file set
: Target gene predictions for BSS01077 kidney capillary endothelial cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR701BDE
released
Annotation file set
: Chromatin states for BSS01077 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR528XCA
released
Annotation file set
: Variant allelic effects of kidney capillary endothelial cell ENCODE DHSseq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR479BAK
released
Annotation file set
: Accessible chromatin annotation of kidney capillary endothelial cell from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP