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Schema
Clear Filters
Annotation type
2
candidate regulatory elements
1
caQTL
1
chromatin state
1
target gene predictions
Annotation Category
3
cis-regulatory elements
1
Genetic variant effects
1
Target gene links
Annotation type Category
4
ChIP-seq
3
DNase-seq
1
snATAC-seq
Available data
4
bed bed3+
1
bed bed9
File set status
5
released
Genome assembly (visualization)
4
hg19
2
GRCh38
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
35
fibroblast
32
adipose tissue
29
adipocyte
26
subcutaneous adipose tissue
24
pericyte cell
19
foreskin fibroblast
19
mesenchymal stem cell
18
omental fat pad
17
fibroblast of cardiac tissue
17
osteoblast
16
fibroblast of lung
12
fibroblast of dermis
12
hepatic stellate cell
12
skin fibroblast
10
pancreatic stellate cell
8
fibroblast of mammary gland
8
fibroblast of pulmonary artery
8
fibroblast of villous mesenchyme
7
GM23248
7
chondrocyte
7
mesangial cell
6
subcutaneous abdominal adipose tissue
5
cardiac fibroblast
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Fibroblast
5
Mesangial Cell
5
cardiac fibroblast
5
cartilage tissue
5
fibroblast of peridontal ligament
5
fibroblast of the aortic adventitia
5
fibroblast of the conjunctiva
5
visceral fat
4
HT1080
4
adult endothelial progenitor cell
4
articular chondrocyte
4
bone tissue
4
brain pericyte
4
fibroblast of gingiva
4
preadipocyte
4
stromal cell of bone marrow
4
visceral abdominal adipose tissue
3
amnion mesenchymal stem cell
3
amniotic stem cell
3
pancreatic quiescent stellate cell
3
pulmonary interstitial fibroblast
2
adipose tissue derived mesenchymal stem cell
2
columnar chondrocyte
2
extracellular matrix secreting cell
2
fat cell
2
luteal cell
2
stromal cell
1
omental fat pad
1
Adipose SGBS cell line (adipocyte)
1
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
Preadipose SGBS cell line (adipocyte)
1
SGBS preadipocytes
1
activated pancreatic stellate cell
1
adipose-derived mesenchymal stem cell
1
beige adipocyte
1
cardiac atrium fibroblast
1
cardiac ventricle fibroblast
1
dedifferentiated amniotic fluid mesenchymal stem cell
1
embryonic fibroblast
1
fibroblast of arm
1
fibroblast of skin of abdomen
1
kidney interstitial fibroblast
1
mesenchymal stem cell of adipose
1
pericardium fibroblast
1
quiescent pancreatic stellate cell
1
white adipose cell
1
white adipose tissue
Organ
5
blood vessel
5
connective tissue
5
vasculature
Life stage
4
unknown
Date released
3
September, 2022
1
February, 2021
1
February, 2023
Software used
2
r
1
chromhmm
1
encode-ccres
1
rasqual
Lab
5
AMP-T2D consortium
Project
5
AMP
Collection Tags
3
EpiMap
1
CMDGA
1
ENCODE
RFA
5
AMP
Showing 5 of 5 results
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Download
FileSet
DSR077AGV
released
Annotation file set
: Chromatin accessibility QTLs in fibroblasts passing genome-wide multiple testing correction (5% FDR) of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR902WKL
released
Annotation file set
: Candidate regulatory elements for BSS00347 fibroblast of the aortic adventitia from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR987AUB
released
Annotation file set
: Target gene predictions for BSS00347 fibroblast of the aortic adventitia from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR159VQB
released
Annotation file set
: Chromatin states for BSS00347 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR761GFE
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE fibroblast of the aortic adventitia
Lab:
AMP-T2D consortium
Project:
AMP