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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
accessible chromatin
1
chromatin state
1
target gene predictions
Annotation Category
4
cis-regulatory elements
1
Target gene links
Annotation type Category
4
ChIP-seq
4
DNase-seq
Available data
4
bed bed3+
1
bed bed9
File set status
5
released
Genome assembly (visualization)
5
hg19
1
GRCh38
Organism
5
Homo sapiens
Biosample type
4
primary cell
1
cell line
Biosample term
30
fibroblast
22
pericyte cell
19
foreskin fibroblast
17
fibroblast of cardiac tissue
17
osteoblast
16
fibroblast of lung
12
fibroblast of dermis
11
hepatic stellate cell
11
skin fibroblast
10
SK-N-DZ
10
SK-N-SH
10
choroid plexus epithelial cell
10
pituitary stalk
8
SK-N-MC
8
fibroblast of mammary gland
8
fibroblast of pulmonary artery
8
fibroblast of villous mesenchyme
8
pancreatic stellate cell
7
BE(2)-C
7
GM23248
7
mesangial cell
7
mesenchymal stem cell
6
Daoy
6
astrocyte of the cerebellum
6
astrocyte of the hippocampus
5
cardiac fibroblast
5
A172
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Fibroblast
5
M059J
5
Mesangial Cell
5
brain microvascular endothelial cell
5
fibroblast of peridontal ligament
5
fibroblast of the aortic adventitia
5
fibroblast of the conjunctiva
4
H54
4
HT1080
4
U-87 MG
4
adipocyte
4
adult endothelial progenitor cell
4
brain pericyte
4
cardiac fibroblast
4
fibroblast of gingiva
4
preadipocyte
4
stromal cell of bone marrow
3
amnion mesenchymal stem cell
3
amniotic stem cell
3
medulloblastoma
3
pancreatic quiescent stellate cell
3
pulmonary interstitial fibroblast
2
adipose tissue derived mesenchymal stem cell
2
articular chondrocyte
2
chondrocyte
2
columnar chondrocyte
2
extracellular matrix secreting cell
2
fat cell
2
luteal cell
2
stromal cell
1
brain microvascular endothelial cell
1
BE2C
1
Glioblastoma
1
activated pancreatic stellate cell
1
adipose-derived mesenchymal stem cell
1
cardiac atrium fibroblast
1
cardiac ventricle fibroblast
1
dedifferentiated amniotic fluid mesenchymal stem cell
1
fibroblast of arm
1
fibroblast of skin of abdomen
1
kidney interstitial fibroblast
1
mesenchymal stem cell of adipose
1
pericardium fibroblast
1
quiescent pancreatic stellate cell
Organ
5
connective tissue
5
eye
0
brain
Life stage
4
unknown
Date released
3
September, 2022
1
February, 2021
1
June, 2020
Software used
2
r
1
chromhmm
1
encode-ccres
1
macs
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
Showing 5 of 5 results
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Download
FileSet
DSR132SMN
released
Annotation file set
: Candidate regulatory elements for BSS00349 fibroblast of the conjunctiva from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR811DGR
released
Annotation file set
: Target gene predictions for BSS00349 fibroblast of the conjunctiva from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR354NUQ
released
Annotation file set
: Chromatin states for BSS00349 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR758XPL
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE fibroblast of the conjunctiva
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR782AET
released
Annotation file set
: Accessible chromatin annotation for Others HConF from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP