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Clear Filters
Annotation type
  • 2candidate regulatory elements
  • 2target gene predictions
  • 1accessible chromatin
  • 1chromatin state
Annotation Category
  • 4cis-regulatory elements
  • 2Target gene links
Annotation type Category
  • 5DNase-seq
  • 4ChIP-seq
Available data
  • 5bed bed3+
  • 1bed bed9
File set status
  • 6released
Genome assembly (visualization)
  • 5hg19
  • 2GRCh38
Organism
  • 6Homo sapiens
Biosample type
  • 5primary cell
  • 1cell line
Biosample term
  • 43retina
  • 20pigmented layer of retina
  • 19retinal pigment epithelial cell
  • 11eye
  • 10WERI-Rb-1
  • 6fibroblast of the conjunctiva
  • 6iris pigment epithelial cell
  • 3amacrine cell
  • 3retinal bipolar neuron
  • 2Muller cell
  • 2Schwann cell
  • 2astrocyte
  • 2cell of skeletal muscle(extraocular)
  • 2corneal epithelial cell
  • 2endothelial cell of vascular tree
  • 2fibroblast
  • 2macrophage
  • 2melanocyte
  • 2muscle precursor cell
  • 2pigmented ciliary epithelial cell
  • 2retina horizontal cell
  • 2retinal cone cell
  • 2retinal ganglion cell
  • 2retinal progenitor cell
  • 2retinal rod cell
  • 2smooth muscle cell
  • 2trabecular meshwork cell
  • 1 retinal pigment epithelial cell
  • 1corneal epithelium
  • 1non-pigmented ciliary epithelial cell
  • 1retinal cell
Organ
  • 6eye
  • 5connective tissue
Life stage
  • 4unknown
Date released
  • 3September, 2022
  • 1February, 2021
  • 1July, 2026
  • 1June, 2020
Software used
  • 2r
  • 1chromhmm
  • 1encode-ccres
  • 1macs
Lab
  • 6AMP-T2D consortium
Project
  • 6AMP
Collection Tags
  • 3EpiMap
  • 1ChIP-Atlas
  • 1ENCODE
  • 1ENCODE-rE2G
RFA
  • 6AMP

Showing 6 of 6 results

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  • FileSet

    DSR073939

    released

    Annotation file set: Target gene predictions for fibroblast of the conjunctiva (CL:0002550) derived from ENCODE-rE2G (ENCSR105XMT).
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR132SMN

    released

    Annotation file set: Candidate regulatory elements for BSS00349 fibroblast of the conjunctiva from EpiMap
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR811DGR

    released

    Annotation file set: Target gene predictions for BSS00349 fibroblast of the conjunctiva from EpiMap
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR354NUQ

    released

    Annotation file set: Chromatin states for BSS00349 using the 18-state Roadmap model from EpiMap
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR758XPL

    released

    Annotation file set: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE fibroblast of the conjunctiva
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR782AET

    released

    Annotation file set: Accessible chromatin annotation for Others HConF from ChIP-atlas
    Lab: AMP-T2D consortium
    Project: AMP
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