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Clear Filters
Annotation type
  • 2binding sites
  • 2candidate regulatory elements
  • 1accessible chromatin
  • 1chromatin state
  • 1histone modifications
  • 1target gene predictions
Annotation Category
  • 7cis-regulatory elements
  • 1Target gene links
Annotation type Category
  • 7ChIP-seq
  • 4DNase-seq
Available data
  • 7bed bed3+
  • 1bed bed9
File set status
  • 8released
Genome assembly (visualization)
  • 8hg19
  • 1GRCh38
Organism
  • 8Homo sapiens
Biosample type
  • 8primary cell
Biosample term
  • 60placenta
  • 8fibroblast of villous mesenchyme
  • 3HTR-8/Svneo
  • 1placental hematopoietic stem cell
  • 1placental villus capillary endothelial cell
Organ
  • 8connective tissue
  • 8extraembryonic component
  • 8placenta
Life stage
  • 4unknown
Date released
  • 3February, 2021
  • 3September, 2022
  • 1June, 2020
  • 1October, 2022
Software used
  • 3macs
  • 2chromhmm
  • 2r
  • 1encode-ccres
Lab
  • 8AMP-T2D consortium
Project
  • 8AMP
Collection Tags
  • 3ChIP-Atlas
  • 3EpiMap
  • 2ENCODE
RFA
  • 8AMP

Showing 8 of 8 results

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  • FileSet

    DSR287CKF

    released

    Annotation file set: Binding sites annotation for fibroblast of villous mesenchyme (HVMF) for GOLDENPATH ENCODE DCC
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR974XHA

    released

    Annotation file set: Candidate regulatory elements for BSS00350 fibroblast of villous mesenchyme from EpiMap
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR488HWF

    released

    Annotation file set: Target gene predictions for BSS00350 fibroblast of villous mesenchyme from EpiMap
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR866HKF

    released

    Annotation file set: Chromatin states for BSS00350 using the 18-state Roadmap model from EpiMap
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR005FAU

    released

    Annotation file set: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE fibroblast of villous mesenchyme
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR457YAR

    released

    Annotation file set: Histone modifications annotation for Placenta HVMF from ChIP-atlas
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR108FJC

    released

    Annotation file set: Binding sites annotation for Placenta HVMF from ChIP-atlas
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR263KFM

    released

    Annotation file set: Accessible chromatin annotation for Placenta HVMF from ChIP-atlas
    Lab: AMP-T2D consortium
    Project: AMP
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