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Schema
Citing CMDGA
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Annotation type
1
accessible chromatin
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
snATAC-seq
Available data
1
bed bed3+
1
bigWig
File set status
1
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
1
Homo sapiens
Biosample type
1
primary cell
Biosample term
32
endothelial cell
28
hepatocyte
17
pancreatic beta cell
16
endothelial cell of hepatic sinusoid
16
pancreatic acinar cell
16
pancreatic delta cell
16
pancreatic ductal cell
15
endothelial cell of umbilical vein
15
pancreatic alpha cell
13
keratinocyte
12
foreskin keratinocyte
12
mammary gland epithelial cell
9
kidney tubule cell
8
epithelial cell of proximal tubule
8
glomerular endothelial cell
7
bronchial epithelial cell
7
epithelial cell of prostate
7
kidney glomerular epithelial cell
7
luminal epithelial cell of mammary gland
7
renal cortical epithelial cell
7
retinal pigment epithelial cell
7
type II pneumocyte
6
choroid plexus epithelial cell
6
colon epithelial cell
6
cortical cell of adrenal gland
6
dermis blood vessel endothelial cell
6
dermis lymphatic vessel endothelial cell
6
enterocyte
6
glomerular visceral epithelial cell
6
kidney epithelial cell
6
myoepithelial cell of mammary gland
6
pancreatic polypeptide-secreting cell
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
5
Afferent / Efferent Arteriole Endothelial Cell
5
Connecting Tubule Cell
5
Cortical Thick Ascending Limb Cell
5
Cycling Endothelial Cell
5
Cycling Epithelial Cell
5
Degenerative Connecting Tubule Cell
5
Degenerative Connecting Tubule Cell / Principal Cell
5
Degenerative Cortical Thick Ascending Limb Cell
5
Degenerative Distal Convoluted Tubule Cell
5
Degenerative Intercalated Cell Type A
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Principal Cell
5
Degenerative Proximal Tubule Epithelial Cell
5
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
5
Descending Thin Limb Cell Type 1
5
Distal Convoluted Tubule Cell Type 1
5
Glomerular Capillary Endothelial Cell
5
Intercalated Cell Type A
5
Intercalated Cell Type B
5
Lymphatic Endothelial Cell
5
Medullary Thick Ascending Limb Cell
5
Parietal Epithelial Cell
5
Peritubular Capillary Endothelial Cell
5
Podocyte
5
Principal Cell
5
Proximal Tubule Epithelial Cell Segment 1 and 2
5
Proximal Tubule Epithelial Cell Segment 3
5
Transitional Principal-Intercalated Cell
5
epithelial cell of esophagus
5
kidney capillary endothelial cell
5
pancreatic endothelial cell
4
brain microvascular endothelial cell
4
endothelial cell of lymphatic vessel
4
iris pigment epithelial cell
4
mammary epithelial cell
4
mesothelial cell
4
non-pigmented ciliary epithelial cell
4
pancreatic alpha+beta cell
4
pancreatic cycling alpha cell
4
pancreatic gamma+epsilon cell
4
pulmonary artery endothelial cell
4
type I pneumocyte
3
aortic endothelial cell
3
club cell
3
endocardial cell
3
epidermal melanocyte
3
epithelial cell of amnion
3
goblet cell
3
lung microvascular endothelial cell
3
pancreatic A cell
3
parietal cell
3
peptic cell
3
thyroid follicular cell
3
type B pancreatic cell
2
basal cell of epidermis
2
capillary endothelial cell
2
cardiac endothelial cell
2
eccrine cell
2
enterochromaffin-like cell
2
enterocyte of epithelium of small intestine
2
foveolar cell of stomach
2
granular cell of epidermis
2
kidney distal convoluted tubule epithelial cell
2
myoepithelial cell
2
non keratinizing barrier epithelial cell
2
paneth cell
2
renal principal cell
2
respiratory goblet cell
2
small intestine goblet cell
2
stomach neuroendocrine cell
2
type I cell of adrenal cortex
2
type II cell of adrenal cortex
1
brain microvascular endothelial cell
1
retinal pigment epithelial cell
1
Liver fetal (hepatocyte)
1
bronchial goblet cell
1
cholangiocyte
1
chromaffin cell of adrenal gland
1
ciliated epithelial cell
1
endothelial cell of coronary artery
1
enteroendocrine cell
1
gastric goblet cell
1
granulosa cell
1
kidney connecting tubule epithelial cell
1
kidney loop of Henle ascending limb epithelial cell
1
kidney loop of Henle epithelial cell
1
kidney loop of Henle thin descending limb epithelial cell
1
kidney proximal convoluted tubule epithelial cell
1
kidney proximal straight tubule epithelial cell
1
luminal epithelial cell of prostatic duct
1
lung neuroendocrine cell
1
neuroendocrine cell
1
parietal epithelial cell
1
placental villus capillary endothelial cell
1
renal alpha-intercalated cell
1
renal beta-intercalated cell
1
renal intercalated cell
1
tracheal epithelial cell
1
ureteric bud
Organ
1
epithelium
1
stomach
0
adrenal gland
Date released
1
November, 2021
Software used
1
macs
Lab
1
Bing Ren, UCSD
Project
1
ENCODE
RFA
1
ENCODE3
month_released!
February, 2021
Showing 1 of 1 results
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Download
FileSet
DSR347BSL
released
Annotation file set
: Accessible chromatin annotation of Fetal Gastric Goblet Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE