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Schema
Citing CMDGA
Clear Filters
Annotation type
2
accessible chromatin
1
eQTL
1
histone modifications
Annotation Category
3
cis-regulatory elements
1
Genetic variant effects
Annotation type Category
2
DNase-seq
1
ChIP-seq
1
RNA-seq
Available data
3
bed bed3+
File set status
4
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
85
heart
73
brain
72
kidney
67
muscle of arm
62
lung
62
stomach
59
placenta
57
muscle of leg
55
large intestine
54
muscle of back
54
small intestine
52
left lung
47
thymus
45
right lung
42
right kidney
40
renal cortex interstitium
40
renal pelvis
36
left kidney
35
adrenal gland
30
spinal cord
27
islet of Langerhans
23
liver
19
heart left ventricle
17
retina
16
chorionic villus
16
muscle of trunk
14
heart right ventricle
13
spleen
12
left cardiac atrium
12
left renal cortex interstitium
12
left renal pelvis
12
right renal pelvis
11
right renal cortex interstitium
11
trophoblast
10
chorion membrane
9
eye
9
testis
9
tongue
8
limb
7
adipose tissue
7
ovary
7
pancreas
7
psoas muscle
7
skeletal muscle tissue
6
coronary artery
6
prostate gland
6
sigmoid colon
6
skin of body
6
umbilical cord
5
germinal matrix
5
right atrium auricular region
5
tibial artery
4
amnion
4
caudate nucleus
4
cortex of kidney
4
embryonic facial prominence
4
femur
4
frontal cortex
4
layer of hippocampus
4
occipital lobe
4
putamen
4
subcutaneous adipose tissue
4
substantia nigra
4
tibial nerve
4
urinary bladder
3
arm bone
3
cerebellum
3
endocrine pancreas
3
germinal center
3
leg bone
3
midbrain
3
prefrontal cortex
3
temporal lobe
3
upper lobe of left lung
2
hindlimb muscle
2
muscle of leg
2
Ammon's horn
2
amygdala
2
aorta
2
breast carcinoma
2
chorion
2
colonic mucosa
2
dorsolateral prefrontal cortex
2
endometrium cancer
2
esophagus
2
esophagus muscularis mucosa
2
first pancreatic bud
2
forelimb muscle
2
globus pallidus
2
hypothalamus
2
kidney epithelium
2
mammary gland
2
nucleus accumbens
2
pancreatic ductal cell
2
pancreatic stellate cell
2
pituitary gland
2
placental basal plate
2
respiratory system smooth muscle
2
right cardiac atrium
2
skin of forearm
2
skin of prepuce of penis
2
superior temporal gyrus
2
thoracic aorta
2
thyroid gland
2
tissue
2
transverse colon
2
uterus
1
left kidney
1
omental fat pad
1
Brodmann (1909) area 9
1
Crypt of Lieberkuhn
1
Pancreatic islets
1
Peyer's patch
1
Schwann cell
1
abdominal aorta artery
1
anterior cingulate cortex
1
anterior parahippocampal gyrus
1
aortic valve
1
arcuate nucleus of hypothalamus
1
ascending aorta
1
bed nucleus of stria terminalis
1
bladder (urinary bladder)
1
body of pancreas
1
breast
1
breast epithelium
1
caput epididymis
1
cardiogenic mesoderm
1
cartilage tissue
1
cerebellar hemisphere
1
cerebellum (Hemisphere)
1
cingulate gyrus
1
circle of Willis
1
claustrum of brain
1
colon
1
colon sigmoid
1
corneal epithelium
1
cortex
1
crypt of Lieberkuhn
1
dentate nucleus
1
diencephalon
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
dorsal lateral geniculate nucleus
1
duodenal mucosa
1
dura mater
1
endometrium
1
endothelial cell
1
entorhinal cortex
1
epididymis
1
esophagus mucosa
1
esophagus squamous epithelium
1
fallopian tube
1
fetal heart
1
frontal pole
1
gastric (mucosa of stomach)
1
gastrocnemius medialis
1
glomerular epithelium
1
gyrus rectus
1
hindlimb muscle
1
inferior parietal cortex
1
intestinal epithelium
1
left leg bone
1
locus ceruleus
1
medial dorsal nucleus of thalamus
1
medulla oblongata
1
medulloblastoma
1
metanephros
1
mid-frontal lobe
1
minor salivary gland
1
mitral valve
1
morula
1
mucosa of rectum
1
myelencephalon
1
nucleus of ventral thalamus
1
pancreatic A cell
1
pancreatic D cell
1
pancreatic PP cell
1
pancreatic acinar cell
1
pancreatic adenocarcinoma
1
pancreatic carcinoma
1
paraventricular nucleus of hypothalamus
1
parietal lobe
1
pineal body
1
piriform cortex
1
pons
1
pontine tegmentum
1
precentral gyrus
1
precuneus cortex
1
proximal epiphysis
1
proximal epiphysis of femur
1
proximal epiphysis of humerus
1
proximal epiphysis of tibia
1
pulmonary valve
1
pulvinar nucleus
1
raphe nuclei
1
rectum smooth muscle tissue
1
red nucleus
1
renal connecting tubule
Organ
2
brain
2
intestine
2
large intestine
Life stage
adult
Date released
2
June, 2020
1
February, 2021
1
January, 2022
May, 2021
Software used
3
macs
1
qTLtools
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
month_released!
May, 2021
relevant_life_stage!
adult
Showing 4 of 4 results
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Download
FileSet
DSR899VFT
released
Annotation file set
: colon transverse eQTL of studay GTEx from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR763UYO
released
Annotation file set
: Histone modifications annotation for Neural Globus_Pallidus from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR561JAO
released
Annotation file set
: Accessible chromatin annotation for Neural Globus Pallidus from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR464RYV
released
Annotation file set
: Accessible chromatin annotation for Adipocyte Colon, Transverse from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP