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Citing CMDGA
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Annotation type
5
accessible chromatin
Annotation Category
5
cis-regulatory elements
Annotation type Category
4
ATAC-seq
1
snATAC-seq
Available data
5
bed bed3+
1
bigWig
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
9
pigmented layer of retina
7
retina
6
retinal pigment epithelial cell
5
chondrocyte
4
glutamatergic neuron
3
SGBS preadipocytes
2
capillary endothelial cell
2
extracellular matrix secreting cell
1
B cell
1
Progenitor cell of Hypothalamus (neural progenitor cell)
1
T cell
1
adipocyte
1
adipose tissue
1
basal cell
1
ciliated cell
1
club cell
1
embryonic stem cell
1
endothelial cell of artery
1
endothelial cell of lymphatic vessel
1
erythrocyte
1
gabaergic neuron
1
macrophage
1
microglial cell/astrocyte
1
myofibroblast cell
1
natural killer cell
1
neuroendocrine cell
1
neuron
1
neuron cell of Hypothalamus (neuron)
1
non-neuronal cell
1
oligodendrocyte
1
pericyte cell
1
type I pneumocyte
1
type II pneumocyte
Life stage
4
adult
Date released
9
September, 2022
6
February, 2021
November, 2021
4
November, 2022
2
January, 2021
1
April, 2020
1
August, 2021
1
January, 2022
1
June, 2020
1
May, 2020
1
May, 2021
Software used
4
macs
Lab
4
AMP-T2D consortium
1
Xin Sun, UCSD
Project
4
AMP
1
LungMap
RFA
4
AMP
1
LungMap2
month_released!
November, 2021
Showing 5 of 5 results
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Download
FileSet
DSR936UDZ
released
Annotation file set
: Accessible chromatin of glutamatergic neurons from primary visual cortex from four postmortem donors, three males and one female, ages 20–28 from a single brain collection.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR223FVD
released
Annotation file set
: Accessible chromatin of glutamatergic neurons from dorsolateral prefrontal cortex from four postmortem donors, three males and one female, ages 20–28 from a single brain collection.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR357LJU
released
Annotation file set
: Accessible chromatin of glutamatergic neurons from anterior cingulate cortex from four postmortem donors, three males and one female, ages 20–28 from a single brain collection.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR341UVB
released
Annotation file set
: Accessible chromatin of glutamatergic neurons from four postmortem donors, three males and one female, ages 20–28 from a single brain collection.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR382SMZ
released
Annotation file set
: ATAC-seq peaks in NK cells from lung snATAC-seq
Lab:
Xin Sun, UCSD
Project:
LungMap