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Citing CMDGA
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Annotation type
3
gene expression
2
chromatin state
Annotation Category
3
Gene expression levels
2
cis-regulatory elements
Annotation type Category
2
ChIP-seq
2
RNA-seq
1
scRNA-seq
Available data
bed bed3+
3
bigWig
3
tsv
2
bed bed9
2
bigBed bed9
File set status
4
released
1
revoked
Genome assembly (visualization)
2
GRCh38
2
hg19
Organism
5
Homo sapiens
Biosample type
5
tissue
Biosample term
7
coronary artery
7
right atrium auricular region
5
heart
5
heart left ventricle
5
left ventricle myocardium
3
heart right ventricle
3
right cardiac atrium
2
smooth muscle cell of the coronary artery
1
aortic valve
1
cardiac atrium fibroblast
1
cardiac fibroblast
1
cardiac ventricle fibroblast
1
endothelial cell of coronary artery
1
left cardiac atrium
1
mitral valve
1
pulmonary valve
1
tricuspid valve
Organ
5
heart
Life stage
2
embryonic
2
fetal
1
adult
Date released
September, 2022
1
April, 2019
1
August, 2021
1
February, 2020
1
February, 2021
1
May, 2020
Software used
3
r
2
chromhmm
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
biosample_term_name!
SK-N-DZ
files.file_type!
bed bed3+
month_released!
September, 2022
Showing 5 of 5 results
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FileSet
DSR321UPS
released
Annotation file set
: Gene expression annotation of heart left ventricle from single-cell transcriptome analysis map the developmental track of the human heart
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR384FIT
released
Annotation file set
: Gene expression of heart (atria and ventricle)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR670YAY
released
Annotation file set
: Gene expression levels of Heart fetal from RNA-seq (GSE63634) + RNA-seq (ENCODE) + RNA-seq (GSE106690)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR032VAF
revoked
Annotation file set
: ChromHMM 5-state model for heart fetal from 5 GSE63634 ChIP-seq data (very large promoter regions, revoked)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR552DTP
released
Annotation file set
: ChromHMM 15-state model for fetal hearts from ENCODE ChIP-seq data. ROADMAP fetal heart Annotation
Lab:
AMP-T2D consortium
Project:
AMP