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Citing CMDGA
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Embeddings type
2
Gene expression
1
Accessible chromatin
Embeddings Category
3
umap
Underlying Assay
10X scRNA-seq
2
10X snRNA-seq
2
Smart-seq
1
10X snATAC-seq
Available data
3
h5ad
1
mtx
1
tsv
File set status
3
released
Organism
3
Homo sapiens
Biosample type
3
tissue
1
primary cell
Biosample term
3
islet of Langerhans
2
heart
2
lung
2
skeletal muscle tissue
1
carotid canal
1
pancreas
1
peripheral blood mononuclear cell
1
tissues
0
kidney
Tissue term
2
heart
1
blood
1
pancreas
Organ
1
blood
1
bodily fluid
1
heart
1
pancreas
Life stage
1
adult
Date released
1
August, 2021
1
February, 2023
1
September, 2020
Lab
2
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Project
2
AMP
1
T1D
RFA
2
AMP
1
T1D
embeddings_underlying_assay!
10X scRNA-seq
Showing 3 of 3 results
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FileSet
DSR549TWY
released
Embeddings file set
: Using large-scale single nuclei RNA sequencing, defined the transcriptional and cellular diversity in the normal human heart.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR758NPF
released
Embeddings file set
: snRNA-seq embedding on nuclei isolated from cardiac chambers from four human donors without cardiovascular pathology
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR047LET
released
Embeddings file set
: Clustering of accessible chromatin profiles from 131,554 cells from single cell experiments of peripheral blood mononuclear cells, whole pancreas tissue, and purified pancreatic islets
Lab:
Kyle Gaulton, UCSD
Project:
T1D