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Citing CMDGA
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Embeddings type
4
Gene expression
1
Accessible chromatin
Embeddings Category
5
umap
Underlying Assay
2
10X scRNA-seq
2
10X snRNA-seq
2
Smart-seq
1
sciATAC-seq
Available data
5
h5ad
2
mtx
2
tsv
File set status
5
released
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
islet of Langerhans
4
pancreas
3
heart
3
lung
2
kidney
2
peripheral blood mononuclear cell
2
skeletal muscle tissue
1
bladder organ
1
blood
1
bone marrow
1
carotid canal
1
cell
1
endothelial cell
1
epithelial cell
1
eye
1
fat pad
1
immune system
1
large intestine
1
liver
1
lymph node
1
major salivary gland
1
mammary gland
1
muscle organ
1
prostate gland
1
skin of body
1
small intestine
1
spleen
1
stromal cell
1
thymus
1
tissues
1
tongue
1
trachea
1
uterus
1
vasculature
Tissue term
3
heart
1
liver
1
tissues
Organ
2
heart
1
liver
Life stage
3
adult
Date released
2
May, 2022
1
February, 2023
1
November, 2021
1
September, 2020
Lab
4
AMP-T2D consortium
1
Bing Ren, UCSD
Project
4
AMP
1
ENCODE
RFA
4
AMP
1
ENCODE3
biosample_term_name!
islet of Langerhans
Showing 5 of 5 results
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FileSet
DSR549TWY
released
Embeddings file set
: Using large-scale single nuclei RNA sequencing, defined the transcriptional and cellular diversity in the normal human heart.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR956GXS
released
Embeddings file set
: The human cell atlas of Liver from 15 normal human subjects (22-74 years old) from Tabula Sapiens.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR271MPP
released
Embeddings file set
: The human cell atlas of Heart from 15 normal human subjects (22-74 years old) from Tabula Sapiens.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR838CLG
released
Embeddings file set
: snATAC embedding for raw TN5 insertion counts for each promoter region and cCRE in each cell for multiple tissues
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR758NPF
released
Embeddings file set
: snRNA-seq embedding on nuclei isolated from cardiac chambers from four human donors without cardiovascular pathology
Lab:
AMP-T2D consortium
Project:
AMP