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Schema
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Embeddings type
4
Gene expression
Embeddings Category
4
umap
Underlying Assay
2
10X snRNA-seq
1
10X scRNA-seq
Smart-seq
Available data
2
h5ad
2
rds
1
mtx
1
tsv
File set status
4
released
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
6
islet of Langerhans
4
artery
4
heart
4
liver
4
pancreas
4
skeletal muscle
2
kidney
2
lung
2
peripheral blood mononuclear cell
2
skeletal muscle tissue
2
subcutaneous adipose tissue
1
carotid canal
1
hypothalamus
1
immune system
1
tissues
1
visceral abdominal adipose tissue
1
visceral fat
Tissue term
4
heart
Organ
3
heart
Life stage
1
adult
Date released
2
June, 2025
1
February, 2023
1
September, 2020
Lab
3
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Project
4
AMP
RFA
3
AMP
1
AMP2
embeddings_underlying_assay!
Smart-seq
Showing 4 of 4 results
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FileSet
DSR445357
released
Embeddings file set
: Integrate object with UMAP and RNA counts for FNIH multiome, CAREHF multiome, DPT and HiC.
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR513108
released
Embeddings file set
: Single cell reference map of human heart chambers
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR549TWY
released
Embeddings file set
: Using large-scale single nuclei RNA sequencing, defined the transcriptional and cellular diversity in the normal human heart.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR758NPF
released
Embeddings file set
: snRNA-seq embedding on nuclei isolated from cardiac chambers from four human donors without cardiovascular pathology
Lab:
AMP-T2D consortium
Project:
AMP