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Schema
Citing CMDGA
Clear Filters
Annotation type
3
candidate regulatory elements
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
ChIP-seq
3
DNase-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
in vitro differentiated cells
2
tissue
1
primary cell
Biosample term
25
kidney
22
stomach
21
heart
20
breast cancer cell
17
brain
17
lung
17
muscle of arm
15
epithelial cell of proximal tubule
15
large intestine
15
muscle of back
15
placenta
14
adrenal gland
14
common myeloid progenitor, CD34-positive
14
muscle of leg
14
small intestine
13
glomerular endothelial cell
13
left lung
12
neuroblastoma cell
11
gastric cancer cell
10
renal cortex interstitium
10
right lung
10
thymus
9
Rhabdomyosarcoma
9
islet of Langerhans
9
left kidney
9
liposarcoma
9
liver
9
mammary epithelial cell
9
renal pelvis
8
CD4-positive, alpha-beta T cell
8
MCF-7
8
diffuse intrinsic pontine glioma
8
foreskin fibroblast
8
keratinocyte
8
right kidney
8
spleen
7
B-lymphoblastoid cell line
7
CD8-positive, alpha-beta T cell
7
endothelial cell
7
fibroblast cell line
7
heart left ventricle
7
kidney loop of Henle thin ascending limb epithelial cell
7
spinal cord
6
H9
6
acute myeloid leukemia
6
bronchial epithelial cell
6
cardiac muscle cell
6
foreskin keratinocyte
6
hESC cell
6
kidney interstitial cell
6
melanoma
6
osteoblast
5
A549
5
B cell
5
CD4-positive, alpha-beta memory T cell
5
Chondroid Chordoma
5
Ewing sarcoma
5
adipose tissue
5
endothelial cell of umbilical vein
5
esophageal adenocarcinoma
5
esophageal squamous cell carcinoma
5
glioblastoma multiforme cancer stem cell
5
hepatocyte
5
kidney loop of Henle thick ascending limb epithelial cell
5
natural killer cell
5
pancreas
5
prostate cancer cell line
5
testis
4
22Rv1
4
CD14-positive monocyte
4
HEK293
4
HS-SY-2 cell
4
HepG2
4
Jurkat
4
LNCAP
4
Mantle cell lymphoma
4
Peyer's patch
4
RS4-11 cell
4
Rh-4 cell
4
T-cell
4
Tumor-derived cell line
4
WI38
4
body of pancreas
4
bone tissue
4
chorionic villus
4
dermal fibroblast
4
dermis blood vessel endothelial cell
4
epithelial cell of prostate
4
esophagus squamous epithelium
4
gastroesophageal sphincter
4
glioblastoma cell
4
glioma cell
4
glomerular visceral epithelial cell
4
immortal neural cell line cell
4
kidney cortex collecting duct principal cell
4
layer of hippocampus
4
left renal pelvis
4
lower leg skin
4
lymphoblastoid cell line
4
melanoma cell
4
nephron progenitor
4
neural progenitor cell
4
osteosarcoma
4
right renal pelvis
4
sigmoid colon
4
squamous cell lung carcinoma
4
synovial sarcoma cell
4
tracheal epithelial cell
4
triple-negative breast cancer
4
upper lobe of left lung
3
B-lymphocyte
3
CD1c-positive myeloid dendritic cell
3
CMK
3
COLO-320 cell
3
COLO205
3
GM06990
3
GM12864
3
GM12865
3
GM12873
3
GM12875
3
GM12878
3
GM23248
3
HAP-1
3
HL-60
3
HT-29
3
IMR-90
3
Ishikawa
3
K562
3
LHCN-M2
3
MCF 10A
3
MG63
3
MM.1S
3
OCI-LY1
3
OCI-LY7
3
PC-3
3
PC-9
3
RKO
3
RPMI8226
3
RWPE1
3
S-shaped body
3
SK-N-DZ
3
SK-N-MC
3
SW480
3
T-helper 1 cell
3
WERI-Rb-1
3
adult endothelial progenitor cell
3
ascending aorta
3
breast epithelium
3
cardiac fibroblast
3
caudate nucleus
3
choroid plexus epithelial cell
3
chronic lymphocytic leukemia cell
3
colonic mucosa
3
diffuse large B-cell lymphoma
3
embryonic stem cell
3
endocrine pancreas
3
epithelial ovarian cancer cell
3
esophagus muscularis mucosa
3
fibroblast of cardiac tissue
3
fibroblast of lung
3
fibroblast of mammary gland
3
gastrocnemius medialis
3
hematopoietic cell
3
hepatic stellate cell
3
kidney cell
3
kidney connecting tubule epithelial cell
3
kidney cortex collecting duct intercalated cell
3
kidney distal convoluted tubule epithelial cell
3
kidney inner medulla collecting duct principal cell
3
kidney loop of Henle descending limb epithelial cell
3
kidney resident macrophage
3
left renal cortex interstitium
3
leukemic stem cell
3
lung fibroblast cell line
3
lymphoblast
3
mesangial cell
3
meso-epithelial cell
3
metastatic melanoma
3
naive thymus-derived CD4-positive, alpha-beta T cell
3
subcutaneous adipose tissue
2
143B
2
501A
2
697 cell
2
769-P cell
2
786-O cell
2
A-1847 cell
2
A-375 cell
2
A-498 cell
2
A-673 cell
2
AG04449 cell
2
AG04450 cell
2
AG09309 cell
2
AG09319 cell
2
AG10803
2
AG10803 cell
2
AGS cell
2
ALL-SIL cell
2
Adipose stromal cell
2
AsPC-1 cell
2
B-cell lymphoma cell
Organ
2
vagina
1
musculature of body
Life stage
3
adult
Date released
9
September, 2022
4
November, 2021
3
February, 2021
2
February, 2024
1
February, 2020
1
January, 2022
1
March, 2024
1
May, 2022
1
October, 2019
Software used
3
encode-ccres
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
biosample_type!
in vitro differentiated cells
Showing 3 of 3 results
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Download
FileSet
DSR460MOH
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE vagina
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR860UKY
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE vagina
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR650BYN
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE skeletal muscle satellite cell
Lab:
AMP-T2D consortium
Project:
AMP