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Schema
Clear Filters
Annotation type
2
candidate regulatory elements
2
target gene predictions
1
chromatin state
Annotation Category
3
cis-regulatory elements
2
Target gene links
Annotation type Category
4
ChIP-seq
4
DNase-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
4
bed bed3+
1
bed bed9
File set status
5
released
Genome assembly (visualization)
5
hg19
1
GRCh38
Organism
5
Homo sapiens
Biosample type
5
cell line
Biosample term
27
keratinocyte
24
foreskin keratinocyte
23
foreskin fibroblast
14
dermis blood vessel endothelial cell
13
fibroblast of dermis
12
fibroblast
12
lower leg skin
12
skin fibroblast
8
dermis lymphatic vessel endothelial cell
7
GM23248
7
skin of body
6
RPMI7951
6
SK-MEL-5
6
dermis microvascular lymphatic vessel endothelial cell
6
iPS DF 4.7 Cell Line
5
iPS DF 19.11
5
suprapubic skin
4
COLO829
4
cell of skeletal muscle
4
epidermal melanocyte
4
iPS DF 19.7
4
iPS DF 6.9
4
iPS-11a
4
iPS-15b
4
iPS-18a
4
iPS-18c
4
iPS-20b
3
fibroblast of skin of abdomen
2
BJ
2
Schwann cell
2
Schwann cell precursor
2
basal cell of epidermis
2
endothelial cell of lymphatic vessel
2
endothelial cell of vascular tree
2
epidermoblast
2
fibroblast of skin of left biceps
2
fibroblast of skin of left quadriceps
2
fibroblast of skin of scalp
2
fibroblast of upper back skin
2
foreskin melanocyte
2
granular cell of epidermis
2
keratinocyte(interfollicular)
2
macrophage
2
melanocyte
2
pericyte
2
skin of forearm
2
skin of prepuce of penis
1
AG04449
1
AG04450
1
AG08395
1
AG08396
1
AG09309
1
AG09319
1
AG10803
1
AG20443
1
C803
1
HFF-Myc
1
HFFc6
1
HGPS cell
1
HT1080
1
fibroblast of arm
1
fibroblast of gingiva
1
fibroblast of peridontal ligament
1
fibroblast of skin of back
1
fibroblast of skin of right biceps
1
fibroblast of skin of right quadriceps
1
iPS DF 4.7
1
skin - not sun exposed (suprapubic)
1
skin - sun exposed (lower leg)
Organ
5
skin of body
Life stage
3
newborn
1
postnatal
Date released
3
September, 2022
1
February, 2021
1
May, 2021
Software used
2
r
1
abc
1
chromhmm
1
encode-ccres
Lab
4
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
5
AMP
Collection Tags
3
EpiMap
1
DGA
1
ENCODE
RFA
5
AMP
Showing 5 of 5 results
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Download
FileSet
DSR895SKI
released
Annotation file set
: Candidate regulatory elements for BSS00731 iPS DF 19.11 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR985UCV
released
Annotation file set
: Target gene predictions for BSS00731 iPS DF 19.11 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR241URV
released
Annotation file set
: Chromatin states for BSS00731 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR584ZJC
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE iPS DF 19.11
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR544HLF
released
Annotation file set
: enhancer-gene predicton of iPS_DF_19.11_Cell_Line-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP