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Getting started
Schema
Clear Filters
Annotation type
3
target gene predictions
1
candidate regulatory elements
1
chromatin state
Annotation Category
3
Target gene links
2
cis-regulatory elements
Annotation type Category
4
DNase-seq
3
ChIP-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
4
bed bed3+
1
bed bed9
File set status
5
released
Genome assembly (visualization)
4
hg19
2
GRCh38
Organism
5
Homo sapiens
Biosample type
5
cell line
Biosample term
2636
whole blood
135
monocyte
93
fibroblast
92
heart
91
endothelial cell
86
head of caudate nucleus
86
stomach
80
kidney
76
brain
74
macrophage
73
A549
70
placenta
69
smooth muscle cell
67
muscle of arm
66
CD8-positive, alpha-beta T cell
66
HeLa-S3
65
lung
64
T-cell
63
adrenal gland
62
small intestine
60
B cell
59
dorsolateral prefrontal cortex
57
muscle of leg
56
CD4-positive, alpha-beta T cell
56
large intestine
55
stimulated activated CD4-positive, alpha-beta T cell
54
H1-hESC
54
left lung
54
muscle of back
52
common myeloid progenitor, CD34-positive
51
hepatocyte
51
neural progenitor cell
48
natural killer cell
48
posterior cingulate gyrus
48
thymus
47
K562
46
hematopoietic multipotent progenitor cell
45
T cell
45
islet of Langerhans
45
right lung
44
adipocyte
44
liver
42
right kidney
40
renal cortex interstitium
40
renal pelvis
40
retina
38
heart left ventricle
36
left kidney
35
CD14-positive monocyte
34
pericyte
34
spinal cord
33
activated CD4-positive, alpha-beta T cell
33
cardiac muscle cell
32
CD4-positive, alpha-beta memory T cell
32
glutamatergic neuron
32
keratinocyte
31
pancreatic ductal cell
30
adipose tissue
30
astrocyte
30
spleen
29
MCF-7
29
T-helper 1 cell
26
T-helper 17 cell
26
heart right ventricle
26
regulatory T cell
25
CD8-positive, alpha-beta memory T cell
25
epithelial cell of proximal tubule
25
ovary
25
pancreas
25
stimulated activated CD8-positive, alpha-beta memory T cell
25
tibial nerve
24
body of pancreas
24
dendritic cell
24
endothelial cell of lymphatic vessel
24
pericyte cell
24
trophoblast cell
23
EndoC_BH1
23
T-helper 2 cell
23
naive thymus-derived CD4-positive, alpha-beta T cell
23
neuron
22
GABAergic neuron
21
HCT116
21
caudate nucleus
21
glomerular endothelial cell
20
breast cancer cell
20
coronary artery
20
gastrocnemius medialis
20
naive thymus-derived CD8-positive, alpha-beta T cell
20
psoas muscle
20
right atrium auricular region
20
sigmoid colon
20
tibial artery
19
HFFc6
19
endocardial cell
19
hepatic stellate cell
19
mononuclear cell
19
thyroid gland
19
upper lobe of left lung
18
HepG2
18
embryonic stem cell
18
endothelial cell of umbilical vein
18
mast cell
18
mesenchymal stem cell
18
pancreatic beta cell
18
pigmented layer of retina
18
subcutaneous adipose tissue
17
H9
17
erythroblast
17
foreskin fibroblast
17
foreskin keratinocyte
17
frontal cortex
17
testis
17
transverse colon
16
endothelial cell of hepatic sinusoid
16
fibroblast of cardiac tissue
16
induced pluripotent stem cell
15
GM12878
15
activated T-cell
15
ascending aorta
15
mammary gland epithelial cell
15
muscle of trunk
15
pancreatic acinar cell
15
pancreatic alpha cell
15
pancreatic delta cell
15
skeletal muscle satellite cell
14
Peyer's patch
14
activated CD8-positive, alpha-beta memory T cell
14
cerebellum
14
fibroblast of lung
14
omental fat pad
14
retinal pigment epithelial cell
13
bronchial epithelial cell
13
excitatory neuron
13
glomerular visceral epithelial cell
13
naive B cell
13
osteoblast
13
skeletal muscle myoblast
12
endocrine pancreas
12
fibroblast of dermis
12
layer of hippocampus
12
left cardiac atrium
12
lymphoblastoid cell line
12
mammary epithelial cell
12
neuroblastoma cell
12
prostate gland
11
Ammon's horn
11
aorta
11
chorionic villus
11
left renal cortex interstitium
11
neutrophil
11
progenitor cell of endocrine pancreas
11
putamen
10
IMR-90
10
Rhabdomyosarcoma
10
dermis blood vessel endothelial cell
10
gastric cancer cell
10
inflammatory macrophage
10
kidney tubule cell
10
left renal pelvis
10
lymphocyte
10
mesothelial cell
10
skeletal muscle tissue
10
thyroid follicular cell
9
SK-N-DZ
9
SK-N-SH
9
WERI-Rb-1
9
breast epithelium
9
cardiomyocytes
9
choroid plexus epithelial cell
9
colonic mucosa
9
diffuse intrinsic pontine glioma
9
epithelial cell of prostate
9
limb
9
liposarcoma
9
megakaryocyte
9
memory B cell
9
progenitor cell
9
substantia nigra
8
B Cell
8
GM06990
8
HT-29
8
NAMALWA cell
8
OCI-LY7
8
PC-9
8
colon epithelial cell
8
endodermal cell
8
fibroblast cell line
8
immortal human breast epithelial cell line cell
8
naive T cell
8
occipital lobe
8
pituitary stalk
8
right renal pelvis
8
skin fibroblast
8
tongue
7
22Rv1
7
B-lymphoblastoid cell line
7
GM03348
7
GM12865
7
GM19240
7
HAP-1
Organ
4
skin of body
Life stage
3
newborn
Date released
3
September, 2022
1
July, 2026
1
May, 2021
Software used
2
r
1
abc
1
chromhmm
encode-ccres
Lab
4
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
5
AMP
Collection Tags
3
EpiMap
1
DGA
1
ENCODE-rE2G
RFA
5
AMP
software_used.software.name!
encode-ccres
Showing 5 of 5 results
table-tab-icon
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Download
FileSet
DSR417820
released
Annotation file set
: Target gene predictions for iPS DF 19.11 (EFO:0007096) derived from ENCODE-rE2G (ENCSR772VHZ).
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR895SKI
released
Annotation file set
: Candidate regulatory elements for BSS00731 iPS DF 19.11 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR985UCV
released
Annotation file set
: Target gene predictions for BSS00731 iPS DF 19.11 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR241URV
released
Annotation file set
: Chromatin states for BSS00731 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR544HLF
released
Annotation file set
: enhancer-gene predicton of iPS_DF_19.11_Cell_Line-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP