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Clear Filters
Annotation type
  • 1accessible chromatin
  • 1binding sites
  • 1candidate regulatory elements
  • 1chromatin state
  • 1histone modifications
  • 1target gene predictions
Annotation Category
  • 5cis-regulatory elements
  • 1Target gene links
Annotation type Category
  • 5ChIP-seq
  • 3DNase-seq
Available data
  • 5bed bed3+
  • 1bed bed9
File set status
  • 6released
Genome assembly (visualization)
  • 6hg19
  • 1GRCh38
Organism
  • 6Homo sapiens
Biosample type
  • 3cell line
  • 3in vitro differentiated cells
Biosample term
  • 22foreskin keratinocyte
  • 21keratinocyte
  • 19foreskin fibroblast
  • 12fibroblast of dermis
  • 12skin fibroblast
  • 10dermis blood vessel endothelial cell
  • 10lower leg skin
  • 8dermis lymphatic vessel endothelial cell
  • 7GM23248
  • 6iPS DF 4.7 Cell Line
  • 6skin of body
  • 5RPMI7951
  • 5SK-MEL-5
  • 5iPS DF 19.11
  • 4dermis microvascular lymphatic vessel endothelial cell
  • 4iPS DF 19.7
  • 4iPS DF 6.9
  • 4iPS-11a
  • 4iPS-15b
  • 4iPS-18a
  • 4iPS-18c
  • 4iPS-20b
  • 3COLO829
  • 3epidermal melanocyte
  • 3suprapubic skin
  • 2basal cell of epidermis
  • 2granular cell of epidermis
  • 2skin of forearm
  • 2skin of prepuce of penis
  • 1BJ
  • 1HGPS cell
  • 1fibroblast of arm
  • 1fibroblast of skin of abdomen
  • 1iPS DF 4.7
  • 1skin - not sun exposed (suprapubic)
  • 1skin - sun exposed (lower leg)
Organ
  • 6skin of body
Life stage
  • 3newborn
Date released
  • 3September, 2022
  • 2February, 2021
  • 1June, 2020
Software used
  • 3macs
  • 2r
  • 1chromhmm
Lab
  • 6AMP-T2D consortium
Project
  • 6AMP
Collection Tags
  • 3ChIP-Atlas
  • 3EpiMap
RFA
  • 6AMP

Showing 6 of 6 results

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  • FileSet

    DSR771DBM

    released

    Annotation file set: Candidate regulatory elements for BSS00733 iPS DF 4.7 Cell Line from EpiMap
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR480HBB

    released

    Annotation file set: Target gene predictions for BSS00733 iPS DF 4.7 Cell Line from EpiMap
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR250AAT

    released

    Annotation file set: Chromatin states for BSS00733 using the 18-state Roadmap model from EpiMap
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR867YYD

    released

    Annotation file set: Histone modifications annotation for Pluripotent stem cell iPS_cells from ChIP-atlas
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR475VMZ

    released

    Annotation file set: Binding sites annotation for Pluripotent stem cell iPS_cells from ChIP-atlas
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR856JYQ

    released

    Annotation file set: Accessible chromatin annotation for Pluripotent stem cell iPS cells from ChIP-atlas
    Lab: AMP-T2D consortium
    Project: AMP
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