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Assay category
6
DNA binding
Assay
6
ChIP-seq
Project
6
AMP
RFA
6
AMP
Experiment status
6
released
Genome assembly (visualization)
6
GRCh38
6
hg19
Organism
6
Homo sapiens
Target of assay
44
histone
44
histone modification
34
narrow histone mark
13
control
10
broad histone mark
6
transcription factor
2
nucleotide modification
1
RNA binding protein
Biosample type
6
tissue
Organ
6
pancreas
Life stage
6
unknown
Available data
6
bam
6
bed bed3+
6
bigWig
6
fastq
Platform
5
Illumina HiSeq 2000
Illumina Genome Analyzer
1
Illumina Genome Analyzer IIx
Run type
6
single-ended
Read length (nt)
4
49
3
51
Library made from
6
DNA
Date released
6
August, 2017
Lab
6
AMP-T2D consortium
Replication type
6
anisogenic
Audit category:
6
missing controlled_by
files.platform.term_name!
Illumina Genome Analyzer
month_released!
May, 2021
organ_slims!
esophagus
Showing 6 of 6 results
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Experiment
TSTSR774103
released
Audit not_compliant
1
ChIP-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans male (38 years) and male (62 years) and male (63 years)
Target:
CTCF
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR570121
released
Audit not_compliant
1
ChIP-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans female (46 years) and male (64 years)
Target:
NKX6.1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR797006
released
Audit not_compliant
1
ChIP-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans female (58 years) and female (63 years)
Target:
NKX2.2
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR213602
released
Audit not_compliant
1
ChIP-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans NONE and female (63 years)
Target:
MAFB
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR003436
released
Audit not_compliant
1
ChIP-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans female (38 years) and male (38 years)
Target:
PDX1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR644140
released
Audit not_compliant
1
ChIP-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans male (34 years) and male (38 years)
Target:
FOXA2
Lab:
AMP-T2D consortium
Project:
AMP