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Citing CMDGA
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Assay category
2
DNA binding
Assay
2
ChIP-seq
Project
2
AMP
RFA
2
AMP
Experiment status
2
released
Genome assembly (visualization)
2
GRCh38
2
hg19
Organism
2
Homo sapiens
Target of assay
2
transcription factor
1
histone
1
histone modification
narrow histone mark
Biosample type
2
tissue
Organ
2
pancreas
Life stage
2
unknown
Available data
2
bam
2
bed bed3+
2
bigWig
2
fastq
Platform
2
Illumina Genome Analyzer IIx
2
Illumina HiSeq 2000
Run type
2
single-ended
Read length (nt)
89
101
4
49
2
51
1
125
Library made from
2
DNA
Date released
2
August, 2017
Lab
2
AMP-T2D consortium
Replication type
2
anisogenic
Audit category:
2
missing controlled_by
files.read_length!
20
target.investigated_as!
narrow histone mark
Showing 2 of 2 results
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Experiment
TSTSR003436
released
Audit not_compliant
1
ChIP-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans female (38 years) and male (38 years)
Target:
PDX1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR644140
released
Audit not_compliant
1
ChIP-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans male (34 years) and male (38 years)
Target:
FOXA2
Lab:
AMP-T2D consortium
Project:
AMP