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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
7
accessible chromatin
1
eQTL
Annotation Category
7
cis-regulatory elements
1
Genetic variant effects
Annotation type Category
7
ATAC-seq
1
RNA-seq
Available data
8
bed bed3+
7
bigWig
File set status
8
released
Genome assembly (visualization)
8
hg19
7
GRCh38
Organism
8
Homo sapiens
Biosample type
8
tissue
Biosample term
31
neural progenitor cell
9
H1-hESC
8
islet of Langerhans
8
kidney
6
liver
5
endothelial cell
4
cartilage tissue
3
hepatocyte
3
subcutaneous adipose tissue
2
CD4-positive helper T cell
2
HepG2
2
MIN6
2
adipose tissue
2
blood
2
epithelial cell of proximal tubule
2
erythroblast
2
fibroblast of lung
2
foreskin fibroblast
2
kidney distal convoluted tubule epithelial cell
2
renal principal cell
1
A549
1
AG04449 cell
1
AG04450 cell
1
AG09309 cell
1
AG09319 cell
1
AG10803 cell
1
B-1 B cell
1
B-2 B cell
1
BE(2)-C
1
BJ cell
1
CD8-positive, alpha-beta T cell
1
Caco-2 cell
1
DND-41 cell
1
ECC-1
1
GM06990
1
GM08714
1
GM10847
1
GM12801
1
GM12864
1
GM12865
1
GM12872
1
GM12873
1
GM12874
1
GM12875
1
GM12878
1
GM12891
1
GM12892
1
GM15510
1
GM18505
1
GM18526
1
GM18951
1
GM19099
1
GM19193
1
GM19238
1
GM19239
1
GM19240
1
HAC cell
1
HBMEC cell
1
HCT-116 cell
1
HEK293
1
HEK293-T-REx cell
1
HFF-Myc
1
HGPS cell
1
HL-60
1
HeLa-S3
1
IMR-90
1
K562
1
MCF-7
1
MCF10A-Er-Src cell
1
NB4
1
NHEK
1
NT2-D1 cell
1
Normal Human Astrocytes
1
PANC-1 cell
1
PFSK-1 cell
1
Raji cell
1
SAEC
1
SH-SY5Y cell
1
SK-N-MC
1
SK-N-SH
1
SK-N-SH_RA
1
T-47D cell
1
T-helper 17 cell
1
U-87 MG
1
U2OS
1
WERI-Rb-1
1
WI-38 cell
1
alternatively activated macrophage
1
aorta
1
aortic adventitial fibroblast
1
aortic valve
1
cardiac fibroblast
1
cardiac muscle cell
1
cerebrospinal fluid
1
choroid plexus epithelial cell
1
dendritic cell
1
effector CD8-positive, alpha-beta T cell
1
endothelial cell of umbilical vein
1
esophageal epithelial cell
1
fibroblast
1
fibroblast of dermis
1
fibroblast of mammary gland
1
fibroblast of pulmonary artery
1
fibroblast of villous mesenchyme
1
glioblastoma cell
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
heart
1
heart right ventricle
1
inflammatory macrophage
1
kidney connecting tubule epithelial cell
1
kidney granular cell
1
kidney inner medulla collecting duct epithelial cell
1
kidney interstitial cell
1
kidney interstitial fibroblast
1
kidney loop of Henle ascending limb epithelial cell
1
kidney loop of Henle epithelial cell
1
kidney loop of Henle thin descending limb epithelial cell
1
kidney proximal convoluted tubule epithelial cell
1
kidney proximal convoluted tubule epithelial cell & kidney proximal straight tubule epithelial cell
1
kidney proximal straight tubule epithelial cell
1
left cardiac atrium
1
lymphocyte(CL:0000542) and natural killer cell(CL:0000623)
1
macrophage
1
macrophage(CL:0000235) and neutrophil(CL:0000775)
1
mammary epithelial cell
1
mesenchymal stem cell
mitral valve
1
myotube
1
naive t cell
1
natural killer cell
1
omental fat pad
1
osteoblast
1
progenitor cell
1
proximal tubule cells with injury markers
1
pulmonary valve
1
renal alpha-intercalated cell
1
renal beta-intercalated cell
1
renal epithelial cell
1
renal intercalated cell
1
retinal pigment epithelial cell
1
right cardiac atrium
1
skeletal muscle myoblast
1
skeletal muscle tissue
1
smooth muscle cell
1
spinal cord
1
synovial joint
1
tricuspid valve
1
type I muscle cell
1
type II muscle cell
Disease term
2
diabetes mellitus,hypertensive disorder
1
chronic kidney disease
1
hypertensive disorder
1
hypertensive disorder, chronic kidney disease
Organ
8
kidney
Date released
42
September, 2022
25
February, 2021
8
August, 2021
2
January, 2020
1
April, 2019
1
June, 2020
1
May, 2019
1
May, 2020
0
October, 2022
Software used
7
macs
1
matrix-eQTL
Lab
8
Katalin Susztak, Upenn
Project
8
AMP
RFA
8
AMP2
biosample_term_name!
mitral valve
month_released!
March, 2020
Showing 8 of 8 results
table-tab-icon
matrix-icon
Download
FileSet
DSR049INR
released
Annotation file set
: eQTL of kidney from Katalin Susztak Lab based on 121 kidney samples
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR016ZOX
released
Annotation file set
: Accessible chromatin of kidney from Katalin Susztak 75kidney Project ATAC-seq
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR073KQB
released
Annotation file set
: Accessible chromatin of kidney from Katalin Susztak 75kidney Project ATAC-seq for hypertension group
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR880LWO
released
Annotation file set
: Accessible chromatin of kidney from Katalin Susztak 75kidney Project ATAC-seq for diabetes mellitus/Hypertension group
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR772HPX
released
Annotation file set
: Accessible chromatin of kidney from Katalin Susztak 75kidney Project ATAC-seq for diabetic kidney disease/Hypertension group
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR307LRO
released
Annotation file set
: Accessible chromatin of kidney from Katalin Susztak 75kidney Project ATAC-seq for control group
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR574ZEL
released
Annotation file set
: Accessible chromatin of kidney from Katalin Susztak 75kidney Project ATAC-seq for chronic kidney disease/hypertension group
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR937TUB
released
Annotation file set
: Accessible chromatin of kidney from Katalin Susztak 75kidney Project ATAC-seq for chronic kidney disease group
Lab:
Katalin Susztak, Upenn
Project:
AMP