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Citing CMDGA
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Annotation type
4
eQTL
Annotation Category
4
Genetic variant effects
Annotation type Category
4
RNA-seq
1
RNA microarray
Available data
9
bed bed3+
bigWig
File set status
4
released
Genome assembly (visualization)
3
hg19
1
hg18
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
31
neural progenitor cell
8
H1-hESC
8
islet of Langerhans
6
liver
4
cartilage tissue
3
endothelial cell
3
hepatocyte
3
subcutaneous adipose tissue
2
adipose tissue
2
blood
1
B-1 B cell
1
B-2 B cell
1
CD8-positive, alpha-beta T cell
1
HepG2
1
T-helper 17 cell
1
alternatively activated macrophage
1
aorta
1
aortic valve
1
cerebrospinal fluid
1
dendritic cell
1
effector CD8-positive, alpha-beta T cell
1
epithelial cell of proximal tubule
1
glomerular endothelial cell
1
heart
1
heart right ventricle
1
inflammatory macrophage
1
kidney
1
kidney connecting tubule epithelial cell
1
kidney distal convoluted tubule epithelial cell
1
kidney granular cell
1
kidney inner medulla collecting duct epithelial cell
1
kidney interstitial fibroblast
1
kidney loop of Henle ascending limb epithelial cell
1
kidney loop of Henle thin descending limb epithelial cell
1
left cardiac atrium
1
macrophage
1
mitral valve
1
natural killer cell
omental fat pad
1
progenitor cell
1
pulmonary valve
1
renal alpha-intercalated cell
1
renal beta-intercalated cell
1
renal principal cell
1
right cardiac atrium
1
skeletal muscle tissue
1
synovial joint
1
tricuspid valve
Organ
3
adipose tissue
3
connective tissue
1
kidney
Life stage
3
adult
Date released
42
September, 2022
31
February, 2021
4
August, 2021
3
March, 2020
2
February, 2020
2
May, 2020
1
April, 2019
1
August, 2017
1
February, 2024
1
January, 2018
1
January, 2022
1
June, 2020
Software used
2
matrix-eQTL
1
epacts
1
fast-lmm
1
mach2qtl
Lab
3
AMP-T2D consortium
1
Katalin Susztak, Upenn
Project
4
AMP
RFA
3
AMP
1
AMP2
biosample_term_name!
omental fat pad
files.file_type!
bigWig
Showing 4 of 4 results
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Download
FileSet
DSR513VNX
released
Annotation file set
: eQTL annotation of subcutaneous adipose tissue from PMID:29632379
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR397GGI
released
Annotation file set
: eQTLS in different tissues: subcutaneous fat (609 samples)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR669QFK
released
Annotation file set
: eQTLs from RNA microarray samples from 770 males who are part of the METSIM study of subcutaneous adipose tissue for GSE70353
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR049INR
released
Annotation file set
: eQTL of kidney from Katalin Susztak Lab based on 121 kidney samples
Lab:
Katalin Susztak, Upenn
Project:
AMP