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Schema
Citing CMDGA
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Annotation type
1
accessible chromatin
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
ATAC-seq
Available data
1
bed bed3+
1
bigWig
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
primary cell
Biosample term
26
fibroblast
19
pericyte cell
19
smooth muscle cell
18
macrophage
15
CD14-positive monocyte
12
excitatory neuron
10
astrocyte
9
skeletal muscle fiber
8
T cell
7
CD8-positive, alpha-beta T cell
7
pancreatic stellate cell
6
erythroblast
6
skeletal muscle satellite cell
6
type I muscle cell
type II muscle cell
5
Adaptive / Maladaptive / Repairing Fibroblast
5
B Cell
5
B cell
5
CD4-positive helper T cell
5
Classical Dendritic Cell
5
Connecting Tubule Intercalated Cell Type A
5
Connecting Tubule Principal Cell
5
Cycling T Cell
5
Cytotoxic T Cell
5
Degenerative Vascular Smooth Muscle Cell
5
Fibroblast
5
M2 Macrophage
5
Mesangial Cell
5
Monocyte
5
Monocyte-derived Cell
5
Myofibroblast
5
Natural Killer T Cell
5
Natural Killer T Cell Type 1
5
Natural Killer T Cell Type 2
5
Non-Classical Monocyte
5
Plasma Cell
5
Plasmacytoid Dendritic Cell
5
Regulatory T Cell
5
Renin-positive Juxtaglomerular Granular Cell
5
T Cell
5
Vascular Smooth Muscle Cell / Pericyte
5
basal cell
5
inhibitory neuron
5
natural killer cell
4
adipocyte
4
blood vessel smooth muscle cell
4
enteric smooth muscle cell
4
gabaergic neuron
4
glutamatergic neuron
4
memory B cell
4
mesenchymal stem cell
4
myofibroblast cell
4
pancreatic MUC5B+ductal cell
4
pancreatic macrophage cell
4
pancreatic mast cell
4
smooth muscle cell of the esophagus
3
Cycling Mononuclear Phagocyte
3
Mast Cell
3
ciliated cell
3
enteric neuron
3
fibroblast of cardiac tissue
3
glial cell
3
mast cell
3
megakaryocyte
3
oligodendrocyte precursor cell
3
pancreatic quiescent stellate cell
3
schwann cell
2
CD4-positive, alpha-beta T cell
2
Muller cell
2
Schwann cell
2
T-cell
2
activated CD4-positive, alpha-beta T cell
2
activated CD8-positive, alpha-beta T cell
2
alveolar macrophage
2
articular chondrocyte
2
cardiac muscle cell
2
colon goblet cell
2
conventional dendritic cell
2
extracellular matrix secreting cell
2
fetal cardiomyocyte
2
fibroblast of lung
2
intestinal tuft cell
2
leukocyte
2
luteal cell
2
mature NK T cell
2
melanocyte
2
mesangial cell
2
microglial cell
2
monocyte
2
naive B cell
2
naive t cell
2
naive thymus-derived CD4-positive, alpha-beta T cell
2
naive thymus-derived CD8-positive, alpha-beta T cell
2
natural killer cell mediated cytotoxicity
2
neural cell
2
non-classical monocyte
2
oligodendrocyte
2
plasma cell
2
plasmacytoid dendritic cell
2
regular atrial cardiac myocyte
2
regulatory T cell
2
skeletal muscle fibroblast
2
skin fibroblast
2
stellate neuron
2
stromal cell
2
uterine smooth muscle cell
2
vascular associated smooth muscle cell
2
ventricular cardiac muscle cell
1
B cell, CD19-positive
1
B-1 B cell
1
B-2 B cell
1
CD34-PB
1
CD56-positive, CD161-positive immature natural killer cell
1
Satellite Cells, Skeletal Muscle
1
T-helper 17 cell
1
alternatively activated macrophage
1
cell
1
common myeloid progenitor, CD34-positive
1
dendritic cell
1
effector CD8-positive, alpha-beta T cell
1
endothelial cell of artery
1
erythrocyte
1
extravillous trophoblast
1
fat cell
1
fetal thymocyte
1
fibroblast of arm
1
fibroblast of dermis
1
foreskin fibroblast
1
hepatic stellate cell
1
hepatoblast
1
inflammatory macrophage
1
islet of Langerhans
1
kidney granular cell
1
kidney inner medulla collecting duct epithelial cell
1
kidney interstitial cell
1
kidney interstitial fibroblast
1
kidney proximal convoluted tubule epithelial cell & kidney proximal straight tubule epithelial cell
1
lymphocyte of B lineage
1
lymphocyte(CL:0000542) and natural killer cell(CL:0000623)
1
macrophage(CL:0000235) and neutrophil(CL:0000775)
1
megakaryocyte-erythroid progenitor cell
1
metanephros
1
neuron
1
osteoblast
1
pancreatic endocrine cell
1
pancreatic immune cell
1
peripheral neuron
1
photoreceptor cell
1
placental hematopoietic stem cell
1
proximal tubule cells with injury markers
1
retinal bipolar neuron
1
skeletal muscle myoblast
1
smooth muscle cell of the coronary artery
1
sympathetic neuron
1
trophoblast cell
1
trophoblast giant cell
Organ
1
kidney
Life stage
1
adult
Date released
1
August, 2021
Software used
1
macs
Lab
AMP-T2D consortium
1
Katalin Susztak, Upenn
Project
1
AMP
RFA
1
AMP2
biosample_term_name!
type II muscle cell
lab.title!
AMP-T2D consortium
organ_slims!
epithelium
Showing 1 of 1 results
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Download
FileSet
DSR795NZZ
released
Annotation file set
: Accessible chromatin from Katalin Susztak 75kidney Project of Stroma cells
Lab:
Katalin Susztak, Upenn
Project:
AMP