Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
gene expression
1
accessible chromatin
Annotation Category
2
Gene expression levels
1
cis-regulatory elements
Annotation type Category
2
scRNA-seq
1
ATAC-seq
Available data
2
tsv
2
txt
1
bed bed3+
1
bigWig
File set status
3
released
Genome assembly (visualization)
1
hg19
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
31
neural progenitor cell
8
H1-hESC
8
islet of Langerhans
8
kidney
6
liver
4
cartilage tissue
4
endothelial cell
3
hepatocyte
3
subcutaneous adipose tissue
2
adipose tissue
2
blood
2
kidney distal convoluted tubule epithelial cell
2
renal principal cell
1
B-1 B cell
1
B-2 B cell
1
CD8-positive, alpha-beta T cell
1
HepG2
1
T-helper 17 cell
1
alternatively activated macrophage
1
aorta
1
aortic valve
1
cerebrospinal fluid
1
dendritic cell
1
effector CD8-positive, alpha-beta T cell
1
epithelial cell of proximal tubule
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
heart
1
heart right ventricle
1
inflammatory macrophage
1
kidney connecting tubule epithelial cell
1
kidney granular cell
1
kidney inner medulla collecting duct epithelial cell
1
kidney interstitial cell
1
kidney interstitial fibroblast
1
kidney loop of Henle ascending limb epithelial cell
1
kidney loop of Henle epithelial cell
1
kidney loop of Henle thin descending limb epithelial cell
1
kidney proximal convoluted tubule epithelial cell
1
kidney proximal convoluted tubule epithelial cell & kidney proximal straight tubule epithelial cell
1
kidney proximal straight tubule epithelial cell
1
left cardiac atrium
1
lymphocyte(CL:0000542) and natural killer cell(CL:0000623)
1
macrophage
1
macrophage(CL:0000235) and neutrophil(CL:0000775)
1
mitral valve
1
natural killer cell
1
omental fat pad
1
progenitor cell
1
proximal tubule cells with injury markers
1
pulmonary valve
1
renal alpha-intercalated cell
1
renal beta-intercalated cell
1
renal intercalated cell
1
right cardiac atrium
1
skeletal muscle tissue
1
synovial joint
1
tricuspid valve
Organ
3
epithelium
3
kidney
Life stage
3
adult
Date released
3
August, 2021
Software used
2
r
2
seurat
1
macs
Lab
3
Katalin Susztak, Upenn
Project
3
AMP
RFA
3
AMP2
organ_slims!
testis
vagina
Showing 3 of 3 results
table-tab-icon
matrix-icon
Download
FileSet
DSR863XRA
released
Annotation file set
: Gene expression of kidney from Katalin Susztak FNIH Project scRNA-seq for renal principal cell
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR749FQK
released
Annotation file set
: Gene expression of kidney from Katalin Susztak FNIH Project scRNA-seq for kidney loop of Henle ascending limb epithelial cell
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR766HFA
released
Annotation file set
: Accessible chromatin from Katalin Susztak 75kidney Project of Principle cells
Lab:
Katalin Susztak, Upenn
Project:
AMP