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Schema
Citing CMDGA
Clear Filters
Annotation type
1
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
2
cis-regulatory elements
1
Target gene links
Annotation type Category
3
ChIP-seq
2
DNase-seq
Available data
2
bed bed3+
1
bed bed9
File set status
3
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
90
heart
86
stomach
81
kidney
73
brain
68
lung
67
muscle of arm
63
small intestine
62
adrenal gland
60
placenta
58
muscle of leg
56
large intestine
54
muscle of back
52
left lung
49
liver
48
thymus
45
right lung
44
islet of Langerhans
42
right kidney
40
renal cortex interstitium
40
renal pelvis
40
retina
36
left kidney
34
heart left ventricle
34
spleen
32
adipose tissue
31
spinal cord
25
tibial nerve
24
body of pancreas
23
sigmoid colon
22
caudate nucleus
22
pancreas
21
coronary artery
21
subcutaneous adipose tissue
20
pigmented layer of retina
20
psoas muscle
19
heart right ventricle
19
right atrium auricular region
19
thyroid gland
19
tibial artery
19
transverse colon
18
gastrocnemius medialis
18
omental fat pad
18
substantia nigra
17
muscle of trunk
16
ascending aorta
16
cerebellum
16
chorionic villus
16
frontal cortex
16
layer of hippocampus
16
skeletal muscle tissue
16
upper lobe of left lung
15
endocrine pancreas
15
putamen
14
Peyer's patch
14
prostate gland
14
temporal lobe
13
aorta
12
Ammon's horn
12
left cardiac atrium
12
left renal cortex interstitium
12
left renal pelvis
12
right renal pelvis
11
breast epithelium
11
esophagus muscularis mucosa
11
esophagus squamous epithelium
11
right renal cortex interstitium
11
thoracic aorta
11
trophoblast
10
angular gyrus
10
chorion membrane
10
colonic mucosa
10
esophagus
10
lower leg skin
10
vagina
9
cingulate gyrus
9
duodenal mucosa
9
eye
9
mucosa of rectum
9
parathyroid adenoma
9
right lobe of liver
9
stomach smooth muscle
9
tongue
9
uterus
8
globus pallidus
8
limb
8
midbrain
8
muscle layer of colon
8
muscle layer of duodenum
8
occipital lobe
8
right cardiac atrium
8
urinary bladder
7
amygdala
7
gastroesophageal sphincter
7
hypothalamus
7
nucleus accumbens
7
superior temporal gyrus
6
Brodmann (1909) area 46
6
anterior cingulate cortex
6
cerebellum (Hemisphere)
6
medulla oblongata
6
middle frontal gyrus
6
pons
6
skin of body
6
subcutaneous abdominal adipose tissue
6
umbilical cord
5
C1 segment of cervical spinal cord
5
cartilage tissue
5
cerebellar cortex
5
gastrocnemius medialis(Muscle - Skeletal)
5
germinal matrix
5
left ventricle myocardium
4
amnion
4
bone tissue
4
cortex of kidney
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
4
embryonic facial prominence
4
femur
4
inferior parietal cortex
4
mucosa of stomach
4
rectum smooth muscle tissue
4
visceral abdominal adipose tissue
3
arm bone
3
dorsolateral prefrontal cortex
3
germinal center
3
leg bone
3
prefrontal cortex
3
suprapubic skin
2
hindlimb muscle
2
muscle of leg
2
blood
2
breast carcinoma
2
chorion
2
endometrium cancer
2
fallopian tube
2
first pancreatic bud
2
forelimb muscle
2
kidney epithelium
2
mammary gland
2
middle frontal area 46
2
minor salivary gland
2
pancreatic ductal cell
2
pancreatic stellate cell
2
pituitary gland
placental basal plate
2
respiratory system smooth muscle
2
skeletal muscle
2
skin of forearm
2
skin of prepuce of penis
2
tissue
1
left kidney
1
omental fat pad
1
Brodmann (1909) area 9
1
Crypt of Lieberkuhn
1
Pancreatic islets
1
Schwann cell
1
abdominal aorta artery
1
anterior parahippocampal gyrus
1
aorta wall
1
aortic valve
1
arcuate nucleus of hypothalamus
1
bed nucleus of stria terminalis
1
beige adipocyte
1
bladder
1
bladder (urinary bladder)
1
breast
1
breast - mammary tissue
1
caput epididymis
1
cardiac ventricle
1
cardiogenic mesoderm
1
cerebellar hemisphere
1
cerebrospinal fluid
1
cervix - ectocervix
1
cervix - endocervix
1
circle of Willis
1
claustrum of brain
1
colon
1
colon - sigmoid
1
colon - transverse
1
colon sigmoid
1
corneal epithelium
1
cortex
1
crypt of Lieberkuhn
1
dentate nucleus
1
diencephalon
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
dorsal lateral geniculate nucleus
1
dura mater
1
endometrium
1
endothelial cell
1
entorhinal cortex
1
epididymis
1
esophagus - gastroesophageal junction
1
esophagus - mucosa
1
esophagus - muscularis
1
esophagus mucosa
1
fetal heart
1
frontal pole
Organ
3
bone element
3
limb
3
skeleton
Life stage
3
embryonic
Date released
3
September, 2022
Software used
2
r
1
chromhmm
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
biosample_term_name!
placental basal plate
organ_slims!
gonad
Showing 3 of 3 results
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Download
FileSet
DSR667DQX
released
Annotation file set
: Candidate regulatory elements for BSS01154 leg bone from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR706HZB
released
Annotation file set
: Target gene predictions for BSS01154 leg bone from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR110TWW
released
Annotation file set
: Chromatin states for BSS01154 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP