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Clear Filters
Annotation type
  • 3target gene predictions
  • 2accessible chromatin
  • 1candidate regulatory elements
  • 1chromatin state
Annotation Category
  • 4cis-regulatory elements
  • 3Target gene links
Annotation type Category
  • 3ChIP-seq
  • 2ATAC-seq
  • 2DNase-seq
  • 2snATAC-seq
Available data
  • 6bed bed3+
  • 2bigWig
  • 1bed bed9
File set status
  • 7released
Genome assembly (visualization)
  • 7hg19
  • 5GRCh38
Organism
  • 7Homo sapiens
Biosample type
  • 7primary cell
Biosample term
  • 26MCF-7
  • 16mammary gland epithelial cell
  • 10mammary epithelial cell
  • 8fibroblast of mammary gland
  • 8myoepithelial cell of mammary gland
  • 7T47D
  • 7luminal epithelial cell of mammary gland
  • 3MCF 10A
  • 2mammary gland
Organ
  • 7epithelium
  • 7mammary gland
Life stage
  • 3adult
Date released
  • 4November, 2021
  • 3September, 2022
Software used
  • 2abc
  • 2macs
  • 2r
  • 1chromhmm
Lab
  • 4Bing Ren, UCSD
  • 3AMP-T2D consortium
Project
  • 4ENCODE
  • 3AMP
Collection Tags
  • 4AMP
  • 4T2DKP
  • 3EpiMap
RFA
  • 4ENCODE3
  • 3AMP

Showing 7 of 7 results

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  • FileSet

    DSR309KBV

    released

    Annotation file set: Candidate regulatory elements for BSS01185 luminal epithelial cell of mammary gland from EpiMap
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR679CBG

    released

    Annotation file set: Target gene predictions for BSS01185 luminal epithelial cell of mammary gland from EpiMap
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR380JQI

    released

    Annotation file set: Chromatin states for BSS01185 using the 18-state Roadmap model from EpiMap
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR154LWM

    released

    Annotation file set: Target gene predictions of Mammary Luminal Epithelial Cell 2 from snATAC from Bing Ren Lab
    Lab: Bing Ren, UCSD
    Project: ENCODE
  • FileSet

    DSR114GRY

    released

    Annotation file set: Target gene predictions of Mammary Luminal Epithelial Cell 1 from snATAC from Bing Ren Lab
    Lab: Bing Ren, UCSD
    Project: ENCODE
  • FileSet

    DSR221MTY

    released

    Annotation file set: Accessible chromatin annotation of Mammary Luminal Epithelial Cell 2 from snATAC from Bing Ren Lab
    Lab: Bing Ren, UCSD
    Project: ENCODE
  • FileSet

    DSR245LTB

    released

    Annotation file set: Accessible chromatin annotation of Mammary Luminal Epithelial Cell 1 from snATAC from Bing Ren Lab
    Lab: Bing Ren, UCSD
    Project: ENCODE
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