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Schema
Citing CMDGA
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Annotation type
3
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
4
cis-regulatory elements
1
Target gene links
Annotation type Category
5
ChIP-seq
4
DNase-seq
Available data
4
bed bed3+
1
bed bed9
File set status
5
released
Genome assembly (visualization)
5
hg19
1
GRCh38
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
68
lung
62
A549
52
left lung
45
right lung
41
K562
16
GM12878
16
fibroblast of lung
16
upper lobe of left lung
12
bronchial epithelial cell
9
IMR-90
8
GM06990
8
GM19240
8
HAP-1
8
HL-60
8
NAMALWA cell
8
OCI-LY7
8
PC-9
7
CMK
7
GM12875
7
GM19238
7
GM19239
7
RPMI8226
7
WI38
7
type II pneumocyte
6
GM12891
6
GM12892
6
KBM-7
6
peripheral blood mononuclear cell
5
NB4
5
lung microvascular endothelial cell
4
DOHH2
4
GM12873
4
GM18505
4
GM19099
4
GM19193
4
NCI-H226 cell
4
NCI-H460 cell
4
SU-DHL-6
4
type I pneumocyte
3
GM10847
3
GM12872
3
GM18526
3
GM18951
3
club cell
3
peripheral blood stem cell
2
NAMALWA
2
SUDHL6
2
blood
1
GM12874
1
Karpas-422
1
NCI-H226
1
NCI-H460
1
bronchial goblet cell
1
cerebrospinal fluid
1
endothelial cell of artery
1
lung neuroendocrine cell
1
whole blood
Organ
5
epithelium
5
lung
5
vasculature
0
bodily fluid
0
bronchus
Life stage
5
unknown
Date released
3
September, 2022
2
February, 2021
Software used
2
encode-ccres
2
r
1
chromhmm
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
organ_slims!
vagina
Showing 5 of 5 results
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Download
FileSet
DSR476YJE
released
Annotation file set
: Candidate regulatory elements for BSS01206 lung microvascular endothelial cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR502IOI
released
Annotation file set
: Target gene predictions for BSS01206 lung microvascular endothelial cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR052EZN
released
Annotation file set
: Chromatin states for BSS01206 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR724PTV
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE lung microvascular endothelial cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR948MMS
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE lung microvascular endothelial cell
Lab:
AMP-T2D consortium
Project:
AMP