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Schema
Citing CMDGA
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Annotation type
3
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
4
cis-regulatory elements
1
Target gene links
Annotation type Category
5
ChIP-seq
4
DNase-seq
Available data
4
bed bed3+
1
bed bed9
File set status
5
released
Genome assembly (visualization)
5
hg19
1
GRCh38
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
63
small intestine
21
coronary artery
20
endothelial cell of umbilical vein
16
ascending aorta
16
endothelial cell of hepatic sinusoid
13
aorta
11
thoracic aorta
10
choroid plexus epithelial cell
10
dermis blood vessel endothelial cell
9
duodenal mucosa
8
dermis lymphatic vessel endothelial cell
8
fibroblast of pulmonary artery
8
muscle layer of duodenum
7
endothelial cell of lymphatic vessel
7
pulmonary artery endothelial cell
7
smooth muscle cell of the coronary artery
6
smooth muscle cell of the brain vasculature
5
cardiac fibroblast
5
Afferent / Efferent Arteriole Endothelial Cell
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Vascular Smooth Muscle Cell
5
Glomerular Capillary Endothelial Cell
5
Lymphatic Endothelial Cell
5
Peritubular Capillary Endothelial Cell
5
Vascular Smooth Muscle Cell / Pericyte
5
brain microvascular endothelial cell
5
fibroblast of the aortic adventitia
5
kidney capillary endothelial cell
5
lung microvascular endothelial cell
4
aortic endothelial cell
4
dermis microvascular lymphatic vessel endothelial cell
4
pancreatic endothelial cell
4
vascular associated smooth muscle cell
2
capillary endothelial cell
2
endothelial cell of coronary artery
2
enterocyte of epithelium of small intestine
2
small intestine goblet cell
2
vein endothelial cell
1
brain microvascular endothelial cell
1
abdominal aorta artery
1
aorta wall
1
aortic smooth muscle cell
1
cardiac fibroblast
1
circle of Willis
1
placental villus capillary endothelial cell
1
whole blood
Organ
5
epithelium
5
lung
5
vasculature
0
small intestine
Life stage
5
unknown
Date released
3
September, 2022
2
February, 2021
Software used
2
encode-ccres
2
r
1
chromhmm
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
organ_slims!
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Showing 5 of 5 results
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Download
FileSet
DSR476YJE
released
Annotation file set
: Candidate regulatory elements for BSS01206 lung microvascular endothelial cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR502IOI
released
Annotation file set
: Target gene predictions for BSS01206 lung microvascular endothelial cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR052EZN
released
Annotation file set
: Chromatin states for BSS01206 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR724PTV
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE lung microvascular endothelial cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR948MMS
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE lung microvascular endothelial cell
Lab:
AMP-T2D consortium
Project:
AMP