Search – Common Metabolic Diseases Genome Atlas

Showing 25 of 52 results

FileSet
DSR866128
released
Annotation file set: Accessible chromatin sites for Thymus macrophages (CD163L1+; high expression of Park et al macrophage genes)
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR381741
released
Annotation file set: Accessible chromatin sites for StomachEsophagus macrophage (high PTPRC CD163)
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR212234
released
Annotation file set: Accessible chromatin sites for Spleen Macrophage (CD163+)
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR453632
released
Annotation file set: Accessible chromatin sites for Skin macrophage (PTPRC+, MRC1+, LGMN)
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR772521
released
Annotation file set: Accessible chromatin sites for Muscle macrophages (expression of macrophage markers inlcuding PTPRC/MRC/F13A1)
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR600448
released
Annotation file set: Accessible chromatin sites for Lung macrophage (PTPRC CD163)
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR385667
released
Annotation file set: Accessible chromatin sites for Heart macrophage (PTPRC marker CD163)
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR849672
released
Annotation file set: Accessible chromatin sites for Eye macrophage (PTPRC CD163)
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR223358
released
Annotation file set: Accessible chromatin sites for Brain macrophages (PTPRC LY86 MRC1 CD163L1+; subset with high estimated contamination)
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR019641
released
Annotation file set: Target gene predictions for Thymus macrophages (CD163L1+; high expression of Park et al macrophage genes)
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR448514
released
Annotation file set: Target gene predictions for StomachEsophagus macrophage (high PTPRC CD163)
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR148247
released
Annotation file set: Target gene predictions for Spleen Macrophage (CD163+)
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR824442
released
Annotation file set: Target gene predictions for Skin macrophage (PTPRC+, MRC1+, LGMN)
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR617571
released
Annotation file set: Target gene predictions for Muscle macrophages (expression of macrophage markers inlcuding PTPRC/MRC/F13A1)
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR261657
released
Annotation file set: Target gene predictions for Lung macrophage (PTPRC CD163)
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR833559
released
Annotation file set: Target gene predictions for Heart macrophage (PTPRC marker CD163)
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR292617
released
Annotation file set: Target gene predictions for Eye macrophage (PTPRC CD163)
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR088824
released
Annotation file set: Target gene predictions for Brain macrophages (PTPRC LY86 MRC1 CD163L1+; subset with high estimated contamination)
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR349734
released
Annotation file set: Target gene predictions for Adrenal macrophages (PTPRC+ MRC+ CD163+ IKZF1+; mix of samples)
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR366JDZ
released
Annotation file set: Accessible chromatin annotation of each cell type cluster identified from snRNA+snATAC profiling of human skeletal muscle - macrophage
Lab: Stephen Parker, UMich
Project: AMP
FileSet
DSR088PNU
released
Annotation file set: caQTL results in each cell type cluster identified from snRNA+snATAC profiling of human skeletal muscle - macrophage
Lab: Stephen Parker, UMich
Project: AMP
FileSet
DSR375GZW
released
Annotation file set: eQTL results in each cell type cluster identified from snRNA+snATAC profiling of human skeletal muscle - macrophage
Lab: Stephen Parker, UMich
Project: AMP
FileSet
DSR868SOF
released
Annotation file set: Chromatin accessibility QTLs in macrophages passing genome-wide multiple testing correction (5% FDR) of ATAC-seq in 35 human coronary artery patients
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR101TON
released
Annotation file set: ATAC-seq peaks in macrophages from lung snATAC-seq
Lab: Xin Sun, UCSD
Project: LungMap
FileSet
DSR254KAF
released
Annotation file set: macrophage Salmonella eQTL of studay Nedelec_2016 from eQTL Catalogue
Lab: AMP-T2D consortium
Project: AMP