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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
accessible chromatin
2
gene expression
Annotation Category
2
Gene expression levels
2
cis-regulatory elements
Annotation type Category
2
ATAC-seq
2
RNA-seq
Available data
2
bed bed3+
2
bigWig
2
tsv
File set status
4
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
4
primary cell
0
tissue
Biosample term
128
monocyte
90
heart
84
stomach
73
brain
68
lung
67
muscle of arm
66
kidney
62
small intestine
60
adrenal gland
59
placenta
57
muscle of leg
55
large intestine
54
muscle of back
53
common myeloid progenitor, CD34-positive
52
left lung
47
thymus
45
liver
45
right lung
43
CD8-positive, alpha-beta T cell
42
right kidney
41
islet of Langerhans
40
renal cortex interstitium
40
renal pelvis
40
retina
36
left kidney
35
B cell
34
heart left ventricle
33
spleen
32
CD4-positive, alpha-beta memory T cell
31
adipose tissue
30
spinal cord
26
regulatory T cell
25
tibial nerve
23
T-helper 1 cell
23
body of pancreas
22
CD8-positive, alpha-beta memory T cell
22
epithelial cell of proximal tubule
22
sigmoid colon
21
caudate nucleus
21
pancreas
20
T-helper 17 cell
20
coronary artery
20
glomerular endothelial cell
20
mononuclear cell
20
pigmented layer of retina
19
foreskin keratinocyte
19
heart right ventricle
19
hepatocyte
19
psoas muscle
19
right atrium auricular region
19
tibial artery
18
endothelial cell of umbilical vein
18
omental fat pad
18
subcutaneous adipose tissue
18
testis
18
thyroid gland
18
transverse colon
17
T-helper 2 cell
17
gastrocnemius medialis
17
substantia nigra
17
trophoblast cell
16
CD14-positive monocyte
16
ascending aorta
16
cerebellum
16
chorionic villus
16
frontal cortex
16
muscle of trunk
16
natural killer cell
16
osteoblast
16
skeletal muscle tissue
16
upper lobe of left lung
15
endocrine pancreas
15
foreskin fibroblast
15
layer of hippocampus
15
neutrophil
15
putamen
15
skeletal muscle myoblast
14
Peyer's patch
14
T cell
14
fibroblast of lung
14
prostate gland
13
CD4-positive, alpha-beta T cell
13
aorta
13
neurosphere
13
temporal lobe
12
Ammon's horn
12
bronchial epithelial cell
12
left renal cortex interstitium
12
left renal pelvis
12
naive thymus-derived CD4-positive, alpha-beta T cell
12
right renal pelvis
11
esophagus muscularis mucosa
11
esophagus squamous epithelium
11
fibroblast of dermis
11
mammary epithelial cell
11
right renal cortex interstitium
11
thoracic aorta
11
trophoblast
10
angular gyrus
10
breast epithelium
10
chorion membrane
10
dermis blood vessel endothelial cell
10
endothelial cell
10
esophagus
10
glomerular visceral epithelial cell
10
keratinocyte
10
kidney tubule cell
10
lower leg skin
10
macrophage
10
mammary gland epithelial cell
10
vagina
9
colonic mucosa
9
eye
9
fibroblast of cardiac tissue
9
mature neutrophil
9
naive T cell
9
parathyroid adenoma
9
retinal pigment epithelial cell
9
right lobe of liver
9
tongue
8
cingulate gyrus
8
duodenal mucosa
8
epithelial cell of prostate
8
fibroblast of breast
8
fibroblast of mammary gland
8
fibroblast of pulmonary artery
8
fibroblast of villous mesenchyme
8
globus pallidus
8
hepatic stellate cell
8
kidney glomerular epithelial cell
8
limb
8
midbrain
8
mucosa of rectum
8
muscle layer of colon
8
muscle layer of duodenum
8
myoepithelial cell of mammary gland
8
occipital lobe
8
renal cortical epithelial cell
8
right cardiac atrium
8
stomach smooth muscle
8
urinary bladder
8
uterus
7
CD1c-positive myeloid dendritic cell
7
amygdala
7
astrocyte
7
choroid plexus epithelial cell
7
gastroesophageal sphincter
7
hypothalamus
7
kidney epithelial cell
7
kidney loop of Henle thin ascending limb epithelial cell
7
left cardiac atrium
7
naive thymus-derived CD8-positive, alpha-beta T cell
7
nucleus accumbens
7
pancreatic ductal cell
7
pulmonary artery endothelial cell
7
skeletal muscle satellite cell
7
skin fibroblast
7
superior temporal gyrus
6
Brodmann (1909) area 46
6
anterior cingulate cortex
6
astrocyte of the cerebellum
6
astrocyte of the hippocampus
6
cerebellum (Hemisphere)
6
dermis lymphatic vessel endothelial cell
6
foreskin melanocyte
6
gamma-delta T cell
6
kidney interstitial cell
6
medulla oblongata
6
middle frontal gyrus
6
olfactory receptor cell
6
peripheral blood mononuclear cell
6
pons
6
skeletal muscle cell
6
skin of body
6
smooth muscle cell of the brain vasculature
6
subcutaneous abdominal adipose tissue
6
umbilical cord
5
cardiac fibroblast
5
C1 segment of cervical spinal cord
5
CD14-positive, CD16-negative classical monocyte
5
T follicular helper cell
5
alternatively activated macrophage
5
brain microvascular endothelial cell
5
cardiac muscle cell
5
central memory CD8-positive, alpha-beta T cell
5
cerebellar cortex
5
effector memory CD8-positive, alpha-beta T cell
5
erythroblast
5
fibroblast of peridontal ligament
5
fibroblast of the aortic adventitia
5
gastrocnemius medialis(Muscle - Skeletal)
5
germinal matrix
5
iris pigment epithelial cell
5
kidney capillary endothelial cell
5
kidney cortex collecting duct principal cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
left ventricle myocardium
5
lung microvascular endothelial cell
5
memory B cell
5
mesangial cell
Date released
2
May, 2020
2
May, 2021
Software used
2
r
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
organ_slims!
ovary
Showing 4 of 4 results
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Download
FileSet
DSR548VBM
released
Annotation file set
: GSE118165 gene expression annotation of normal mature natural killer cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR735NRX
released
Annotation file set
: GSE118165 gene expression annotation of LPS-stimulated mature natural killer cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR942SOT
released
Annotation file set
: GSE118189 ATACseq accessible chromatin of normal mature natural killer cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR377FBR
released
Annotation file set
: GSE118189 ATACseq accessible chromatin of LPS-stimulated mature natural killer cell
Lab:
AMP-T2D consortium
Project:
AMP