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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
chromatin state
1
binding sites
1
histone modifications
Annotation Category
4
cis-regulatory elements
Annotation type Category
4
ChIP-seq
Available data
2
bed bed3+
2
bed bed9+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
53
HeLa-S3
50
H1-hESC
38
neural progenitor cell
32
CD8-positive, alpha-beta T cell
32
endothelial cell
30
fibroblast
29
macrophage
29
monocyte
28
islet of Langerhans
23
CD4-positive, alpha-beta memory T cell
23
EndoC_BH1
23
pancreatic ductal cell
22
K562
22
adipocyte
22
foreskin keratinocyte
22
kidney
22
pericyte cell
21
B cell
21
keratinocyte
20
breast cancer cell
20
smooth muscle cell
19
CD14-positive monocyte
19
HFFc6
19
endothelial cell of umbilical vein
19
foreskin fibroblast
18
embryonic stem cell
17
T-helper 17 cell
16
HepG2
16
astrocyte
16
induced pluripotent stem cell
16
regulatory T cell
16
retinal pigment epithelial cell
15
hepatocyte
15
liver
15
osteoblast
14
T cell
14
heart
14
pancreatic acinar cell
13
bronchial epithelial cell
13
excitatory neuron
13
pancreatic beta cell
12
common myeloid progenitor, CD34-positive
12
lymphoblastoid cell line
12
neuroblastoma cell
12
pancreatic delta cell
11
GM12878
11
brain
11
epithelial cell of prostate
11
erythroblast
11
fibroblast of lung
11
skeletal muscle myoblast
stomach
10
22Rv1
10
Rhabdomyosarcoma
10
SK-N-SH
10
choroid plexus epithelial cell
10
gastric cancer cell
10
heart left ventricle
10
lymphocyte
10
neutrophil
10
progenitor cell of endocrine pancreas
9
NAMALWA cell
9
SK-N-DZ
9
T-helper 1 cell
9
T-helper 2 cell
9
cardiac muscle cell
9
cardiomyocytes
9
diffuse intrinsic pontine glioma
9
fibroblast of cardiac tissue
9
liposarcoma
9
mammary epithelial cell
9
mammary gland epithelial cell
9
pancreatic alpha cell
9
thymus
8
B-lymphoblastoid cell line
8
GM06990
8
GM12864
8
GM12865
8
PC-9
8
SK-N-MC
8
colon epithelial cell
8
fibroblast cell line
8
fibroblast of dermis
8
mesenchymal stem cell
8
pancreatic stellate cell
8
pituitary stalk
8
skeletal muscle fiber
8
small intestine
8
spleen
7
BE(2)-C
7
BJ cell
7
CD1c-positive myeloid dendritic cell
7
CD4-positive helper T cell
7
CD4-positive, alpha-beta T cell
7
CD8-positive, alpha-beta memory T cell
7
CMK
7
H9
7
Jurkat
7
MCF-7
7
MG63
7
NT2-D1 cell
7
WERI-Rb-1
7
dermis lymphatic vessel endothelial cell
7
esophageal adenocarcinoma
7
extended pluripotent stem (EPS) cells
7
fibroblast of pulmonary artery
7
foreskin melanocyte
7
glomerular endothelial cell
7
hematopoietic multipotent progenitor cell
7
memory B cell
7
natural killer cell
7
neuronal stem cell
7
pancreas
7
skeletal muscle satellite cell
7
skeletal muscle tissue
6
Chondroid Chordoma
6
Daoy
6
GM08714
6
GM12891
6
GM12892
6
GM18507
6
HUES8
6
Rh-4 cell
6
SGBS preadipocytes
6
WI38
6
adipose tissue
6
chondrocyte
6
fibroblast of mammary gland
6
fibroblast of villous mesenchyme
6
glomerular visceral epithelial cell
6
hESC cell
6
heart right ventricle
6
iPSC derived cell line
6
naive thymus-derived CD4-positive, alpha-beta T cell
6
naive thymus-derived CD8-positive, alpha-beta T cell
6
neuroblastoma cell line
6
placenta
6
psoas muscle
6
type I muscle cell
5
A549
5
A673
5
CyT49
5
Ewing sarcoma
5
GM19240
5
HCT-116 cell
5
HK-2 cell
5
IMR-90
5
KARPAS-422 cell
5
L1-S8
5
Panc1
5
T-cell acute lymphoblastic leukemia
5
acute myeloid leukemia
5
coronary artery
5
enterocyte
5
kidney epithelial cell
5
left cardiac atrium
5
lung
5
non-pigmented ciliary epithelial cell
5
osteosarcoma
5
prostate cancer cell line
5
pulmonary artery endothelial cell
5
renal cortical epithelial cell
5
sigmoid colon
5
skeletal muscle cell
5
skin fibroblast
5
smooth muscle cell of the coronary artery
4
AG04449 cell
4
AG04450 cell
4
AG09309 cell
4
AG09319 cell
4
AG10803 cell
4
B-lymphocyte
4
COLO205
4
Caco-2 cell
4
DND-41
4
EH
4
EL
4
ELR
4
G401
4
GM03348
4
GM12873
4
GM12875
4
GM18505
4
GM19099
4
GM19193
4
GM19238
4
GM19239
4
HAC cell
4
HAP-1
4
HBMEC cell
4
HEK293
4
HL-60
4
HS-SY-2 cell
4
HT-29
4
KOPT-K1
4
L1-S8R
4
LNCAP
4
LoVo cell
4
MDA-MB-231 cell
4
MM.1S
Life stage
adult
2
child
Date released
2
February, 2021
2
May, 2022
Software used
2
chromhmm
2
macs
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
biosample_term_name!
stomach
relevant_life_stage!
adult
embryonic
Showing 4 of 4 results
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Download
FileSet
DSR825RTA
released
Annotation file set
: Chromatin state of mature neutrophil from BLUEPRINT ChromHmm Segmentation of ChIP-Seq data
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR832QLR
released
Annotation file set
: Chromatin state of mature neutrophil from BLUEPRINT ChromHmm Segmentation of ChIP-Seq data
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR034MZJ
released
Annotation file set
: Histone modifications annotation for Blood Neutrophils from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR578SAY
released
Annotation file set
: Binding sites annotation for Blood Neutrophils from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP