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Schema
Citing CMDGA
Clear Filters
Annotation type
1
target gene predictions
Annotation Category
1
Target gene links
Annotation type Category
1
snATAC-seq
Available data
3
bed bed3+
bigWig
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
primary cell
Biosample term
113
monocyte
54
common myeloid progenitor, CD34-positive
45
CD8-positive, alpha-beta T cell
33
B cell
32
CD4-positive, alpha-beta memory T cell
31
CD14-positive monocyte
25
regulatory T cell
22
CD8-positive, alpha-beta memory T cell
21
T-helper 1 cell
20
mononuclear cell
19
T-helper 17 cell
18
natural killer cell
18
trophoblast cell
17
T cell
16
fibroblast of lung
16
foreskin fibroblast
16
macrophage
15
T-helper 2 cell
15
fibroblast
14
neutrophil
14
osteoblast
14
skeletal muscle myoblast
13
neurosphere
13
smooth muscle cell
12
CD4-positive, alpha-beta T cell
12
fibroblast of dermis
12
naive thymus-derived CD4-positive, alpha-beta T cell
12
pericyte cell
10
fibroblast of cardiac tissue
9
astrocyte
9
mature neutrophil
9
naive T cell
9
skeletal muscle satellite cell
8
fibroblast of breast
8
fibroblast of mammary gland
8
fibroblast of pulmonary artery
8
fibroblast of villous mesenchyme
8
skin fibroblast
7
CD1c-positive myeloid dendritic cell
6
T-cell
6
foreskin melanocyte
6
glutamatergic neuron
6
hepatic stellate cell
6
kidney interstitial cell
6
mesenchymal stem cell
6
olfactory receptor cell
6
pancreatic stellate cell
6
peripheral blood mononuclear cell
6
skeletal muscle fiber
5
Adaptive / Maladaptive / Repairing Fibroblast
5
B Cell
5
CD14-positive, CD16-negative classical monocyte
5
CD4-positive helper T cell
5
Classical Dendritic Cell
5
Connecting Tubule Intercalated Cell Type A
5
Connecting Tubule Principal Cell
5
Cycling T Cell
5
Cytotoxic T Cell
5
Degenerative Vascular Smooth Muscle Cell
5
Fibroblast
5
M2 Macrophage
5
Mesangial Cell
5
Monocyte
5
Monocyte-derived Cell
5
Myofibroblast
5
Natural Killer T Cell
5
Natural Killer T Cell Type 1
5
Natural Killer T Cell Type 2
5
Non-Classical Monocyte
5
Plasma Cell
5
Plasmacytoid Dendritic Cell
5
Regulatory T Cell
5
Renin-positive Juxtaglomerular Granular Cell
5
T Cell
5
Vascular Smooth Muscle Cell / Pericyte
5
alternatively activated macrophage
5
cardiac muscle cell
5
erythroblast
5
fibroblast of peridontal ligament
5
fibroblast of the aortic adventitia
5
mast cell
5
memory B cell
5
mesangial cell
5
naive thymus-derived CD8-positive, alpha-beta T cell
5
type I muscle cell
5
type II muscle cell
4
acute myeloid leukemia cell
4
aortic adventitial fibroblast
4
astrocyte of the cerebellum
4
astrocyte of the hippocampus
4
astrocyte of the spinal cord
4
cardiac fibroblast
4
fibroblast of gingiva
4
fibroblast of the conjunctiva
4
gamma-delta T cell
4
inflammatory macrophage
4
myofibroblast cell
4
nephron progenitor
4
pancreatic MUC5B+ductal cell
4
pancreatic macrophage cell
4
pancreatic mast cell
4
plasma cell
4
preadipocyte
4
renal epithelial cell
4
skeletal muscle cell
4
smooth muscle cell of the brain vasculature
4
stromal cell of bone marrow
4
vascular associated smooth muscle cell
3
Cycling Mononuclear Phagocyte
3
Ishikawa
3
Mast Cell
3
Schwann cell
3
T follicular helper cell
3
Th1 cell
3
Th17 cell
3
adipocyte
3
adult endothelial progenitor cell
3
amnion mesenchymal stem cell
3
amniotic stem cell
3
basal cell
3
blood cell
3
bone marrow cell
3
central memory CD8-positive, alpha-beta T cell
3
effector memory CD8-positive, alpha-beta T cell
3
erythroid cell
3
gabaergic neuron
3
kidney cell
3
kidney resident macrophage
3
leukocyte
3
mammary epithelial cell
3
mammary stem cell
3
mononuclear cell of bone marrow
3
myotube
3
naive B cel
3
neoplastic cell
3
pancreatic quiescent stellate cell
3
peripheral blood stem cell
3
pre-B acute lymphoblastic leukemia cell
3
pulmonary interstitial fibroblast
3
regular cardiac myocyte
3
smooth muscle cell of the coronary artery
2
Adipose stromal cell
2
B-lymphocyte
2
CD34-positive, CD38-negative hematopoietic stem cell
2
CD4-positive, CD25-positive, alpha-beta regulatory T cell
2
Kupffer cell
2
Rhabdoid Tumor of the Kidney
2
Th2 cell
2
activated CD4-positive, alpha-beta T cell
2
activated CD8-positive, alpha-beta T cell
2
articular chondrocyte
2
blood vessel smooth muscle cell
2
cardiac muscle myoblast
2
chronic lymphocytic leukemia cell
2
columnar chondrocyte
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
effector memory CD4-positive, alpha-beta T cell
2
enteric smooth muscle cell
2
erythroid progenitor cell
2
fat cell
2
glial cell
2
head and neck squamous cell carcinoma
2
leukemic stem cell
2
mantle cell lymphoma cell
2
mature natural killer cell
2
memory T cell
2
memory regulatory T cell
2
microglial cell
2
naive B cell
2
naive t cell
2
neural cell
2
neuronal stem cell
2
oligodendrocyte
2
pancreatic endocrine cell
2
peripheral blood-derived erythroblast
2
primordial germ cell
2
prostate gland cancer cell
2
renal proximal tubule cell
2
small cell ovarian carcinoma cell
2
smooth muscle cell of the esophagus
2
somatic muscle myotube
1
B cell, CD19-positive
1
B-1 B cell
1
B-1a B cell
1
B-2 B cell
1
B-Lymphocytes
1
B-cell lymphoma cell
1
CD34-PB
1
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
1
CD34-positive, CD38-positive common myeloid progenitor OR CD34-positive, CD38-positive common lymphoid progenitor
1
CD4-Positive T-Lymphocytes
1
CD56-positive, CD161-positive immature natural killer cell
1
Glioblastoma
1
Leydig cell
1
Satellite Cells, Skeletal Muscle
1
Stromal Predominant Kidney Wilms Tumor
1
T-cell lymphoma cell
1
activated pancreatic stellate cell
1
acute myeloid leukemia
Organ
1
bone element
1
bone marrow
Date released
1
January, 2021
May, 2020
Software used
1
cicero
Lab
1
Kyle Gaulton, UCSD
Project
1
T1D
RFA
1
T1D
files.file_type!
bigWig
month_released!
May, 2020
organ_slims!
epithelium
Showing 1 of 1 results
table-tab-icon
matrix-icon
Download
FileSet
DSR345BXM
released
Annotation file set
: coaccessible target genes annotation from snATAC-seq of megakaryocyte
Lab:
Kyle Gaulton, UCSD
Project:
T1D