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Schema
Clear Filters
Annotation type
2
accessible chromatin
2
target gene predictions
Annotation Category
2
Target gene links
2
cis-regulatory elements
Annotation type Category
3
snATAC-seq
1
pCHi-C
Available data
4
bed bed3+
2
bigWig
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
7
MG63
6
OCI-LY1
6
SJSA1
5
L1-S8
5
OCI-LY3
4
HS-27A
4
HS-5
4
KMS-11
4
L1-S8R
4
NCI-H929
4
U2OS
4
bone tissue
4
femur
4
megakaryocyte
4
stromal cell of bone marrow
3
arm bone
3
leg bone
3
mononuclear cell of bone marrow
1
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
1
bone cell
1
bone marrow cell
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
proximal epiphysis
1
proximal epiphysis of femur
1
proximal epiphysis of humerus
1
proximal epiphysis of tibia
Organ
4
bone element
4
bone marrow
Date released
2
January, 2021
1
May, 2020
1
November, 2021
Software used
2
macs
1
chicago
1
cicero
Lab
2
Kyle Gaulton, UCSD
1
AMP-T2D consortium
1
Bing Ren, UCSD
Project
2
T1D
1
AMP
1
ENCODE
Collection Tags
3
T1D
1
AMP
1
BLUEPRINT
1
T2DKP
RFA
2
T1D
1
AMP
1
ENCODE3
Showing 4 of 4 results
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Download
FileSet
DSR326TXQ
released
Annotation file set
: Accessible chromatin annotation of Fetal Megakaryocyte from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR345BXM
released
Annotation file set
: coaccessible target genes annotation from snATAC-seq of megakaryocyte
Lab:
Kyle Gaulton, UCSD
Project:
T1D
FileSet
DSR213MXZ
released
Annotation file set
: accessible chromatin annotation from snATAC-seq of megakaryocyte
Lab:
Kyle Gaulton, UCSD
Project:
T1D
FileSet
DSR992TVD
released
Annotation file set
: Target gene predictions annotation of EGAS00001001911 promoter capture Hi-C of megakaryocyte
Lab:
AMP-T2D consortium
Project:
AMP