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Schema
Citing CMDGA
Clear Filters
Annotation type
1
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
2
cis-regulatory elements
1
Target gene links
Annotation type Category
3
ChIP-seq
2
DNase-seq
Available data
2
bed bed3+
1
bed bed9
File set status
3
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
3
in vitro differentiated cells
Biosample term
54
heart
48
brain
48
muscle of arm
42
lung
42
placenta
41
muscle of leg
39
large intestine
39
left lung
39
muscle of back
39
stomach
37
kidney
36
small intestine
33
right lung
32
right kidney
30
thymus
27
left kidney
27
renal cortex interstitium
27
renal pelvis
24
adrenal gland
21
spinal cord
15
trophoblast cell
12
chorionic villus
12
muscle of trunk
12
neural progenitor cell
9
neurosphere
9
retina
8
left renal cortex interstitium
8
right renal cortex interstitium
7
liver
6
chorion membrane
6
endodermal cell
6
eye
6
heart left ventricle
6
left renal pelvis
6
limb
6
right renal pelvis
6
skin fibroblast
6
tongue
6
trophoblast
4
H1-hESC
4
germinal matrix
4
heart right ventricle
4
kidney capillary endothelial cell
4
left cardiac atrium
3
AG04449 cell
3
AG04450 cell
3
ELF-1
3
ES-I3
3
H7-hESC
3
H9
3
HEK293
3
HEK293T
3
HTR-8/Svneo
3
HUES48
3
HUES6
3
HUES64
3
IMR-90
3
UCSF-4
3
amnion
3
amnion mesenchymal stem cell
3
amniotic stem cell
3
arm bone
3
cardiac mesoderm primordium
3
cardiac muscle cell
3
cardiac precursors (cardiac muscle cell)
3
ectodermal cell
3
embryonic facial prominence
3
femur
3
fibroblast of cardiac tissue
3
hepatocyte
3
islet precursor cell
3
leg bone
3
mesenchymal stem cell
3
mesendoderm
3
mesodermal cell
3
neural cell
3
neuron
3
ovary
3
skin of body
3
smooth muscle cell
3
spleen
3
testis
3
umbilical cord
3
urinary bladder
1
aorta
1
aortic valve
1
astrocyte
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
mitral valve
1
proximal epiphysis
1
proximal epiphysis of femur
1
proximal epiphysis of humerus
1
proximal epiphysis of tibia
1
pulmonary valve
1
right cardiac atrium
1
tricuspid valve
Organ
3
connective tissue
Life stage
4
adult
3
embryonic
1
unknown
Date released
3
September, 2022
Software used
2
r
1
chromhmm
encode-ccres
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
biosample_term_name!
esophagus muscularis mucosa
lab.title!
Jesse Engreitz, Stanford University
software_used.software.name!
encode-ccres
Showing 3 of 3 results
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Download
FileSet
DSR902OPF
released
Annotation file set
: Candidate regulatory elements for BSS01261 mesenchymal stem cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR607MNF
released
Annotation file set
: Target gene predictions for BSS01261 mesenchymal stem cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR073XBJ
released
Annotation file set
: Chromatin states for BSS01261 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP