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Citing CMDGA
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Annotation type
1
accessible chromatin
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
snATAC-seq
Available data
1
bed bed3+
1
bigWig
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
primary cell
Biosample term
18
CD4-positive, alpha-beta memory T cell
9
T-helper 17 cell
9
common myeloid progenitor, CD34-positive
9
extended pluripotent stem (EPS) cells
9
progenitor cell of endocrine pancreas
8
H1-hESC
6
22Rv1
6
B cell
6
CD8-positive, alpha-beta memory T cell
6
bronchial epithelial cell
6
dermis lymphatic vessel endothelial cell
6
epithelial cell of prostate
6
fibroblast of dermis
6
fibroblast of lung
6
keratinocyte
6
neutrophil
6
osteoblast
4
skeletal muscle myoblast
4
skeletal muscle tissue
3
CD14-positive monocyte
3
CD1c-positive myeloid dendritic cell
3
CWRU1
3
GM06990
3
GM12864
3
GM12865
3
GM12891
3
GM12892
3
HK-2 cell
3
KOPT-K1
3
L1-S8
3
L1-S8R
3
NCI-H460 cell
3
NT2-D1 cell
3
PC-9
3
Panc1
3
T cell
3
T-helper 1 cell
3
T-helper 2 cell
3
WI38
3
adipocyte
3
aortic endothelial cell
3
astrocyte
3
astrocyte of the cerebellum
3
astrocyte of the hippocampus
3
astrocyte of the spinal cord
3
brain microvascular endothelial cell
3
chorion membrane
3
choroid plexus epithelial cell
3
colon carcinoma
3
colon epithelial cell
3
endocrine pancreas
3
epidermal melanocyte
3
epithelial cell of amnion
3
epithelial cell of esophagus
3
epithelial cell of proximal tubule
3
fibroblast of cardiac tissue
3
fibroblast of gingiva
3
fibroblast of mammary gland
3
fibroblast of peridontal ligament
3
fibroblast of pulmonary artery
3
fibroblast of the aortic adventitia
3
fibroblast of the conjunctiva
3
fibroblast of villous mesenchyme
3
germinal center
3
glomerular endothelial cell
3
hematopoietic multipotent progenitor cell
3
hepatocyte
3
hepatocyte(AFP)
3
iris pigment epithelial cell
3
kidney epithelial cell
3
lung microvascular endothelial cell
3
mammary gland epithelial cell
3
mononuclear cell
3
naive T cell
3
non-pigmented ciliary epithelial cell
3
pancreatic ductal cell
3
pericyte cell
3
pulmonary artery endothelial cell
3
regular cardiac myocyte
3
regulatory T cell
3
renal cortical epithelial cell
3
retinal pigment epithelial cell
3
skeletal muscle cell
3
smooth muscle cell of the brain vasculature
3
stromal cell of bone marrow
1
cardiac fibroblast
1
BL-2 cell
1
DG-75 cell
1
JVM-2 cell
1
KARPAS-422 cell
1
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
SUDHL5
1
U-266 cell
1
Z-138
1
adipose tissue
1
cardiac precursors (cardiac muscle cell)
1
cardiomyocytes (cardiac muscle cell)
1
endothelial cell
1
excitatory neuron
1
hippocampal neuron
1
leukocyte
1
lower motor neuron
1
mesenchymal stem cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
pancreatic delta cell
1
skeletal muscle satellite cell
1
smooth muscle cell
1
type I muscle cell
1
type II muscle cell
Organ
1
connective tissue
Life stage
17
adult
6
embryonic
3
child
1
unknown
Date released
1
May, 2022
Software used
1
macs
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
biosample_term_name!
tibial nerve
month_released!
February, 2021
Showing 1 of 1 results
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Download
FileSet
DSR707RQM
released
Annotation file set
: Accessible chromatin from snATAC-seq of mesenchymal stem cell from human skeletal muscle
Lab:
AMP-T2D consortium
Project:
AMP