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Schema
Clear Filters
Annotation type
3
target gene predictions
1
accessible chromatin
1
binding sites
1
candidate regulatory elements
1
chromatin state
1
histone modifications
Annotation Category
5
cis-regulatory elements
3
Target gene links
Annotation type Category
5
ChIP-seq
4
DNase-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
1
pCHi-C
Available data
7
bed bed3+
1
bed bed9
File set status
8
released
Genome assembly (visualization)
8
hg19
1
GRCh38
Organism
8
Homo sapiens
Biosample type
7
in vitro differentiated cells
1
stem cell
Biosample term
2636
whole blood
131
monocyte
72
heart
66
kidney
65
stomach
62
HeLa-S3
60
brain
59
A549
54
H1-hESC
51
lung
50
muscle of arm
50
neural progenitor cell
49
small intestine
48
adrenal gland
48
liver
48
placenta
45
islet of Langerhans
44
CD8-positive, alpha-beta T cell
44
endothelial cell
44
muscle of leg
42
large intestine
41
B cell
40
K562
40
common myeloid progenitor, CD34-positive
39
left lung
39
muscle of back
39
thymus
38
macrophage
37
hepatocyte
37
retina
35
fibroblast
34
hematopoietic multipotent progenitor cell
34
right lung
32
right kidney
30
adipose tissue
30
renal pelvis
29
renal cortex interstitium
28
heart left ventricle
28
spinal cord
27
CD14-positive monocyte
27
CD4-positive, alpha-beta memory T cell
27
adipocyte
27
left kidney
26
regulatory T cell
26
smooth muscle cell
25
pancreatic ductal cell
25
spleen
24
pericyte cell
24
subcutaneous adipose tissue
23
EndoC_BH1
23
natural killer cell
22
MCF-7
22
T cell
22
epithelial cell of proximal tubule
22
tibial nerve
21
CD8-positive, alpha-beta memory T cell
20
T-helper 1 cell
20
body of pancreas
20
breast cancer cell
20
caudate nucleus
20
glomerular endothelial cell
20
keratinocyte
20
pigmented layer of retina
19
coronary artery
19
mononuclear cell
19
pancreas
19
trophoblast cell
18
HFFc6
18
T-helper 17 cell
18
embryonic stem cell
18
pancreatic beta cell
18
right atrium auricular region
17
mesenchymal stem cell
17
pancreatic acinar cell
17
pancreatic alpha cell
17
psoas muscle
17
sigmoid colon
17
tibial artery
16
HepG2
16
astrocyte
16
endothelial cell of hepatic sinusoid
16
fibroblast of cardiac tissue
16
heart right ventricle
16
induced pluripotent stem cell
16
osteoblast
16
ovary
15
endothelial cell of umbilical vein
15
frontal cortex
15
mammary gland epithelial cell
15
pancreatic delta cell
15
retinal pigment epithelial cell
15
substantia nigra
15
thyroid gland
14
GM12878
14
T-helper 2 cell
14
ascending aorta
14
foreskin keratinocyte
14
skeletal muscle myoblast
13
cerebellum
13
excitatory neuron
13
fibroblast of lung
13
foreskin fibroblast
13
gastrocnemius medialis
13
neutrophil
13
omental fat pad
13
testis
13
transverse colon
12
cardiac muscle cell
12
endocrine pancreas
12
layer of hippocampus
12
lymphoblastoid cell line
12
muscle of trunk
12
neuroblastoma cell
12
putamen
12
skeletal muscle satellite cell
12
skeletal muscle tissue
11
Ammon's horn
11
aorta
11
bronchial epithelial cell
11
chorionic villus
11
erythroblast
11
fibroblast of dermis
11
glomerular visceral epithelial cell
11
hepatic stellate cell
11
prostate gland
10
Peyer's patch
10
Rhabdomyosarcoma
10
gastric cancer cell
10
left cardiac atrium
10
lymphocyte
10
pancreatic stellate cell
10
progenitor cell of endocrine pancreas
10
skin fibroblast
10
upper lobe of left lung
9
H9
9
cardiomyocytes
9
diffuse intrinsic pontine glioma
9
kidney tubule cell
9
liposarcoma
9
neuronal stem cell
9
temporal lobe
9
trophoblast
8
22Rv1
8
B-lymphoblastoid cell line
8
NAMALWA cell
8
choroid plexus epithelial cell
8
colon epithelial cell
8
fibroblast cell line
8
immortal human breast epithelial cell line cell
8
mammary epithelial cell
8
mast cell
8
naive T cell
8
pituitary stalk
8
skeletal muscle fiber
8
thoracic aorta
7
AG04449 cell
7
AG04450 cell
7
AG09309 cell
7
AG09319 cell
7
AG10803 cell
7
BE(2)-C
7
BJ cell
7
GM12865
7
IMR-90
7
SK-N-SH
7
WERI-Rb-1
7
amygdala
7
breast epithelium
7
cardiomyocytes (cardiac muscle cell)
7
chorion membrane
7
cingulate gyrus
7
dermis lymphatic vessel endothelial cell
7
endometrium adenocarcinoma
7
epithelial cell of prostate
7
esophageal adenocarcinoma
7
esophagus
7
esophagus muscularis mucosa
7
esophagus squamous epithelium
7
extended pluripotent stem (EPS) cells
7
limb
7
mature neutrophil
7
memory B cell
7
mesendoderm
7
naive thymus-derived CD4-positive, alpha-beta T cell
6
Brodmann (1909) area 46
6
CD4-positive helper T cell
6
CD4-positive, alpha-beta T cell
6
CMK
6
Chondroid Chordoma
6
GM06990
6
HT-29
6
HUES8
6
Jurkat
6
KARPAS-422 cell
6
LoVo cell
6
OCI-LY7
6
SK-N-DZ
6
T47D
6
anterior cingulate cortex
6
aorta wall
Life stage
3
embryonic
Date released
3
September, 2022
2
February, 2021
1
June, 2020
1
March, 2020
1
May, 2021
Software used
3
macs
2
r
1
abc
1
chromhmm
encode-ccres
1
nospecificsoft_customcode
Lab
7
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
8
AMP
Collection Tags
3
ChIP-Atlas
3
EpiMap
2
DGA
RFA
8
AMP
software_used.software.name!
encode-ccres
Showing 8 of 8 results
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Download
FileSet
DSR507CRE
released
Annotation file set
: Candidate regulatory elements for BSS01263 mesendoderm from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR401CTI
released
Annotation file set
: Target gene predictions for BSS01263 mesendoderm from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR387DPA
released
Annotation file set
: Chromatin states for BSS01263 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR042QDJ
released
Annotation file set
: Histone modifications annotation for Pluripotent stem cell hESC_derived_mesendodermal_cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR827VVM
released
Annotation file set
: Binding sites annotation for Pluripotent stem cell hESC_derived_mesendodermal_cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR932LQZ
released
Annotation file set
: enhancer-gene predicton of H1_BMP4_Derived_Mesendoderm_Cultured_Cells-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR746BZC
released
Annotation file set
: Accessible chromatin annotation for Pluripotent stem cell hESC derived mesendodermal cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR579JEW
released
Annotation file set
: A target gene prediction annotation in Human Mesendoderm of GSE86189 pCHi-C
Lab:
AMP-T2D consortium
Project:
AMP