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Schema
Citing CMDGA
Clear Filters
Annotation type
1
binding sites
1
gene expression
1
histone modifications
Annotation Category
2
cis-regulatory elements
1
Gene expression levels
Annotation type Category
2
ChIP-seq
1
scRNA-seq
Available data
2
bed bed3+
1
tsv
File set status
3
released
Genome assembly (visualization)
2
hg19
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
126
monocyte
54
common myeloid progenitor, CD34-positive
46
CD8-positive, alpha-beta T cell
38
B cell
37
endothelial cell
33
hepatocyte
32
CD4-positive, alpha-beta memory T cell
31
CD14-positive monocyte
29
fibroblast
26
macrophage
24
regulatory T cell
23
epithelial cell of proximal tubule
22
CD8-positive, alpha-beta memory T cell
22
T cell
22
pericyte cell
21
T-helper 1 cell
21
glomerular endothelial cell
20
endothelial cell of umbilical vein
20
mononuclear cell
20
smooth muscle cell
19
T-helper 17 cell
19
foreskin keratinocyte
18
natural killer cell
18
trophoblast cell
17
astrocyte
17
keratinocyte
17
osteoblast
17
pancreatic ductal cell
16
endothelial cell of hepatic sinusoid
16
fibroblast of lung
16
foreskin fibroblast
16
skeletal muscle myoblast
15
CD4-positive, alpha-beta T cell
15
T-helper 2 cell
15
neutrophil
14
pancreatic acinar cell
14
pancreatic beta cell
13
mammary epithelial cell
13
mammary gland epithelial cell
13
neurosphere
13
pancreatic alpha cell
13
skeletal muscle satellite cell
12
bronchial epithelial cell
12
excitatory neuron
12
fibroblast of cardiac tissue
12
fibroblast of dermis
12
naive thymus-derived CD4-positive, alpha-beta T cell
12
pancreatic delta cell
11
erythroblast
11
glomerular visceral epithelial cell
10
dermis blood vessel endothelial cell
10
kidney tubule cell
10
retinal pigment epithelial cell
9
epithelial cell of prostate
9
hepatic stellate cell
9
mature neutrophil
9
naive T cell
9
skeletal muscle fiber
9
skin fibroblast
8
fibroblast of breast
8
fibroblast of mammary gland
8
fibroblast of pulmonary artery
8
fibroblast of villous mesenchyme
8
glutamatergic neuron
8
kidney glomerular epithelial cell
8
myoepithelial cell of mammary gland
8
renal cortical epithelial cell
7
CD1c-positive myeloid dendritic cell
7
cardiac muscle cell
7
choroid plexus epithelial cell
7
kidney epithelial cell
7
kidney interstitial cell
7
kidney loop of Henle thin ascending limb epithelial cell
7
luminal epithelial cell of mammary gland
7
mesangial cell
7
mesenchymal stem cell
7
pulmonary artery endothelial cell
7
type I muscle cell
7
type II muscle cell
7
type II pneumocyte
6
T-cell
6
alternatively activated macrophage
6
astrocyte of the cerebellum
6
astrocyte of the hippocampus
6
colon epithelial cell
6
cortical cell of adrenal gland
6
dermis lymphatic vessel endothelial cell
6
enterocyte
6
epithelial cell of esophagus
6
foreskin melanocyte
6
mast cell
6
olfactory receptor cell
6
pancreatic stellate cell
6
peripheral blood mononuclear cell
6
skeletal muscle cell
6
smooth muscle cell of the brain vasculature
5
cardiac fibroblast
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
5
Afferent / Efferent Arteriole Endothelial Cell
5
B Cell
5
CD14-positive, CD16-negative classical monocyte
5
CD4-positive helper T cell
5
Classical Dendritic Cell
5
Connecting Tubule Cell
5
Connecting Tubule Intercalated Cell Type A
5
Connecting Tubule Principal Cell
5
Cortical Thick Ascending Limb Cell
5
Cycling Endothelial Cell
5
Cycling Epithelial Cell
5
Cycling T Cell
5
Cytotoxic T Cell
5
Degenerative Connecting Tubule Cell
5
Degenerative Connecting Tubule Cell / Principal Cell
5
Degenerative Cortical Thick Ascending Limb Cell
5
Degenerative Distal Convoluted Tubule Cell
5
Degenerative Intercalated Cell Type A
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Principal Cell
5
Degenerative Proximal Tubule Epithelial Cell
5
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
5
Degenerative Vascular Smooth Muscle Cell
5
Descending Thin Limb Cell Type 1
5
Distal Convoluted Tubule Cell Type 1
5
Fibroblast
5
Glomerular Capillary Endothelial Cell
5
Intercalated Cell Type A
5
Intercalated Cell Type B
5
Lymphatic Endothelial Cell
5
M2 Macrophage
5
Medullary Thick Ascending Limb Cell
5
Mesangial Cell
5
Monocyte
5
Monocyte-derived Cell
5
Myofibroblast
5
Natural Killer T Cell
5
Natural Killer T Cell Type 1
5
Natural Killer T Cell Type 2
5
Non-Classical Monocyte
5
Parietal Epithelial Cell
5
Peritubular Capillary Endothelial Cell
5
Plasma Cell
5
Plasmacytoid Dendritic Cell
5
Podocyte
5
Principal Cell
5
Proximal Tubule Epithelial Cell Segment 1 and 2
5
Proximal Tubule Epithelial Cell Segment 3
5
Regulatory T Cell
5
Renin-positive Juxtaglomerular Granular Cell
5
T Cell
5
Transitional Principal-Intercalated Cell
5
Vascular Smooth Muscle Cell / Pericyte
5
basal cell
5
brain microvascular endothelial cell
5
fibroblast of peridontal ligament
5
fibroblast of the aortic adventitia
5
gabaergic neuron
5
inflammatory macrophage
5
inhibitory neuron
5
iris pigment epithelial cell
5
kidney capillary endothelial cell
5
kidney cortex collecting duct principal cell
5
kidney distal convoluted tubule epithelial cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
lung microvascular endothelial cell
5
memory B cell
5
myofibroblast cell
5
naive thymus-derived CD8-positive, alpha-beta T cell
5
non-pigmented ciliary epithelial cell
5
pancreatic endothelial cell
plasma cell
5
tracheal epithelial cell
4
acute myeloid leukemia cell
4
adipocyte
4
adult endothelial progenitor cell
4
aortic adventitial fibroblast
4
aortic endothelial cell
4
astrocyte of the spinal cord
4
blood vessel smooth muscle cell
4
cardiac fibroblast
4
endothelial cell of lymphatic vessel
4
enteric smooth muscle cell
4
fibroblast of gingiva
4
fibroblast of the conjunctiva
4
gamma-delta T cell
4
kidney connecting tubule epithelial cell
4
leukocyte
4
mesothelial cell
4
nephron progenitor
4
pancreatic MUC5B+ductal cell
4
pancreatic alpha+beta cell
4
pancreatic cycling alpha cell
4
pancreatic gamma+epsilon cell
4
pancreatic macrophage cell
4
pancreatic mast cell
4
pancreatic polypeptide-secreting cell
4
preadipocyte
4
renal epithelial cell
Organ
3
epithelium
Life stage
1
fetal
Date released
3
February, 2021
Software used
2
macs
1
r
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
biosample_term_name!
plasma cell
month_released!
January, 2021
Showing 3 of 3 results
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Download
FileSet
DSR324HID
released
Annotation file set
: Histone modifications annotation for Breast NAMEC8 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR495MDJ
released
Annotation file set
: Binding sites annotation for Breast NAMEC8 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR879UYD
released
Annotation file set
: Gene expression levels (pseudobulks UMIs) of PTA from GSE114530 scRNAseq fetal kidney
Lab:
AMP-T2D consortium
Project:
AMP